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All results from a given calculation for C5H4N4 (purine)

using model chemistry: MP2=FULL/STO-3G

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at MP2=FULL/STO-3G
 hartrees
Energy at 0K-404.834057
Energy at 298.15K-404.841137
HF Energy-404.273614
Nuclear repulsion energy398.324391
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at MP2=FULL/STO-3G
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3857 3429 102.43      
2 A' 3545 3151 12.42      
3 A' 3495 3107 2.40      
4 A' 3489 3101 1.49      
5 A' 1671 1485 37.40      
6 A' 1626 1445 20.25      
7 A' 1570 1396 25.98      
8 A' 1549 1377 58.22      
9 A' 1492 1326 10.74      
10 A' 1429 1271 2.70      
11 A' 1375 1222 4.17      
12 A' 1353 1203 44.50      
13 A' 1289 1146 11.83      
14 A' 1208 1074 3.40      
15 A' 1181 1050 29.72      
16 A' 1129 1003 0.13      
17 A' 1077 957 27.86      
18 A' 955 849 1.11      
19 A' 919 817 5.76      
20 A' 784 696 4.19      
21 A' 653 580 0.53      
22 A' 568 505 1.01      
23 A' 428 381 8.01      
24 A" 994 884 0.42      
25 A" 927 824 5.27      
26 A" 875 778 4.12      
27 A" 795 707 0.57      
28 A" 647 575 0.77      
29 A" 622 553 17.89      
30 A" 434 386 35.67      
31 A" 407 362 66.79      
32 A" 242 215 0.01      
33 A" 225 200 1.30      

Unscaled Zero Point Vibrational Energy (zpe) 21403.6 cm-1
Scaled (by 0.8889) Zero Point Vibrational Energy (zpe) 19025.7 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at MP2=FULL/STO-3G
ABC
0.12767 0.05486 0.03837

See section I.F.4 to change rotational constant units
Geometric Data calculated at MP2=FULL/STO-3G

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.867 -1.326 0.000
C2 -2.171 0.049 0.000
N3 -1.329 1.133 0.000
C4 0.000 0.723 0.000
C5 0.470 -0.636 0.000
C6 -0.541 -1.654 0.000
N7 1.905 -0.703 0.000
C8 2.248 0.612 0.000
N9 1.153 1.519 0.000
H10 -3.251 0.283 0.000
H11 -0.292 -2.730 0.000
H12 3.288 0.969 0.000
H13 1.190 2.559 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.40852.51722.77252.43641.36623.82324.54834.14942.12222.11005.64274.9437
C21.40851.37222.27312.72792.35724.14444.45423.63451.10493.35485.53544.1945
N32.51721.37221.39092.52302.89593.71863.61462.51222.10103.99994.61982.8948
C42.77252.27311.39091.43842.43772.37942.25041.40113.28043.46583.29682.1875
C52.43642.72792.52301.43841.43371.43682.17252.26123.83212.22803.24333.2754
C61.36622.35722.89592.43771.43372.62403.59273.59653.33081.10504.64054.5541
N73.82324.14443.71862.37941.43682.62401.35832.34535.24892.98962.16933.3388
C84.54834.45423.61462.25042.17253.59271.35831.42165.50824.19751.09962.2158
N94.14943.63452.51221.40112.26123.59652.34531.42164.57404.48832.20431.0405
H102.12221.10492.10103.28043.83213.33085.24895.50824.57404.22306.57424.9899
H112.11003.35483.99993.46582.22801.10502.98964.19754.48834.22305.14755.4927
H125.64275.53544.61983.29683.24334.64052.16931.09962.20436.57425.14752.6322
H134.94374.19452.89482.18753.27544.55413.33882.21581.04054.98995.49272.6322

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 129.717 N1 C2 H10 114.672
N1 C6 C5 120.938 N1 C6 H11 116.878
C2 N1 C6 116.316 C2 N3 C4 110.706
N3 C2 H10 115.611 N3 C4 C5 126.176
N3 C4 N9 128.268 C4 C5 C6 116.146
C4 C5 N7 111.690 C4 N9 C8 105.737
C4 N9 H13 126.635 C5 C4 N9 105.556
C5 C6 H11 122.184 C5 N7 C8 101.979
C6 C5 N7 132.164 N7 C8 N9 115.037
N7 C8 H12 123.568 C8 N9 H13 127.628
N9 C8 H12 121.395
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability