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All results from a given calculation for C5H4N4 (purine)

using model chemistry: mPW1PW91/6-311G**

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at mPW1PW91/6-311G**
 hartrees
Energy at 0K-411.945513
Energy at 298.15K-411.953478
HF Energy-411.945513
Nuclear repulsion energy414.204529
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at mPW1PW91/6-311G**
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3695 3535 97.48      
2 A' 3261 3120 0.47      
3 A' 3201 3063 14.40      
4 A' 3190 3052 14.31      
5 A' 1686 1613 66.93      
6 A' 1647 1576 85.83      
7 A' 1551 1484 28.35      
8 A' 1506 1441 2.72      
9 A' 1451 1388 62.93      
10 A' 1434 1372 30.37      
11 A' 1385 1325 60.52      
12 A' 1329 1271 12.62      
13 A' 1320 1263 15.12      
14 A' 1295 1239 34.90      
15 A' 1218 1165 7.37      
16 A' 1151 1101 7.07      
17 A' 1097 1049 16.11      
18 A' 955 914 1.45      
19 A' 921 881 12.60      
20 A' 818 782 14.33      
21 A' 666 637 0.36      
22 A' 574 549 3.81      
23 A' 449 430 13.01      
24 A" 1006 962 0.30      
25 A" 954 913 11.08      
26 A" 896 858 5.88      
27 A" 827 791 11.37      
28 A" 673 644 6.31      
29 A" 630 603 27.53      
30 A" 559 534 95.91      
31 A" 423 404 3.19      
32 A" 249 238 0.56      
33 A" 234 224 5.15      

Unscaled Zero Point Vibrational Energy (zpe) 21124.9 cm-1
Scaled (by 0.9567) Zero Point Vibrational Energy (zpe) 20210.2 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at mPW1PW91/6-311G**
ABC
0.13919 0.05903 0.04145

See section I.F.4 to change rotational constant units
Geometric Data calculated at mPW1PW91/6-311G**

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.809 -1.248 0.000
C2 -2.094 0.068 0.000
N3 -1.265 1.097 0.000
C4 0.000 0.700 0.000
C5 0.450 -0.623 0.000
C6 -0.538 -1.602 0.000
N7 1.826 -0.687 0.000
C8 2.175 0.565 0.000
N9 1.125 1.459 0.000
H10 -3.150 0.308 0.000
H11 -0.313 -2.663 0.000
H12 3.201 0.895 0.000
H13 1.168 2.464 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.34702.40732.65892.34361.31963.67834.37723.99222.05372.05945.44944.7580
C21.34701.32142.18772.63652.28343.99284.29823.50691.08213.26125.35974.0472
N32.40731.32141.32562.42882.79563.56923.48082.41712.04333.87894.47062.7904
C42.65892.18771.32561.39802.36502.29372.17921.35693.17413.37833.20702.1148
C52.34362.63652.42881.39801.39091.37802.09492.18933.71792.17793.14263.1692
C61.31962.28342.79562.36501.39092.53523.47253.48423.23571.08444.49664.4094
N73.67833.99283.56922.29371.37802.53521.29992.25835.07452.91222.09633.2188
C84.37724.29823.48082.17922.09493.47251.29991.37945.33094.07581.07792.1491
N93.99223.50692.41711.35692.18933.48422.25831.37944.42694.36612.15151.0051
H102.05371.08212.04333.17413.71793.23575.07455.33094.42694.10786.37794.8258
H112.05943.26123.87893.37832.17791.08442.91224.07584.36614.10785.00125.3364
H125.44945.35974.47063.20703.14264.49662.09631.07792.15156.37795.00122.5677
H134.75804.04722.79042.11483.16924.40943.21882.14911.00514.82585.33642.5677

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 128.886 N1 C2 H10 115.014
N1 C6 C5 119.667 N1 C6 H11 117.559
C2 N1 C6 117.812 C2 N3 C4 111.480
N3 C2 H10 116.099 N3 C4 C5 126.168
N3 C4 N9 128.590 C4 C5 C6 115.987
C4 C5 N7 111.427 C4 N9 C8 105.576
C4 N9 H13 126.463 C5 C4 N9 105.242
C5 C6 H11 122.773 C5 N7 C8 102.899
C6 C5 N7 132.586 N7 C8 N9 114.856
N7 C8 H12 123.402 C8 N9 H13 127.961
N9 C8 H12 121.743
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at mPW1PW91/6-311G** Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 N -0.342      
2 C 0.136      
3 N -0.353      
4 C 0.432      
5 C -0.109      
6 C 0.173      
7 N -0.353      
8 C 0.206      
9 N -0.434      
10 H 0.128      
11 H 0.135      
12 H 0.132      
13 H 0.249      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  2.218 2.983 0.000 3.717
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -49.867 6.189 0.000
y 6.189 -46.899 0.000
z 0.000 0.000 -51.591
Traceless
 xyz
x -0.622 6.189 0.000
y 6.189 3.830 0.000
z 0.000 0.000 -3.207
Polar
3z2-r2-6.415
x2-y2-2.968
xy6.189
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 14.940 1.377 0.000
y 1.377 11.664 0.000
z 0.000 0.000 5.095


<r2> (average value of r2) Å2
<r2> 252.035
(<r2>)1/2 15.876