return to home page Computational Chemistry Comparison and Benchmark DataBase Release 22 (May 2022) Standard Reference Database 101 National Institute of Standards and Technology
You are here: Calculated > Energy > Optimized > Energy

All results from a given calculation for HO2CCHNH2CH2OH (Serine)

using model chemistry: MP2/CEP-121G

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A
Energy calculated at MP2/CEP-121G
 hartrees
Energy at 0K-77.880841
Energy at 298.15K-77.890475
HF Energy-77.133853
Nuclear repulsion energy176.878610
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at MP2/CEP-121G
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A 3622 3536 22.33      
2 A 3605 3518 3.81      
3 A 3569 3484 41.27      
4 A 3466 3382 2.58      
5 A 3133 3058 19.35      
6 A 3075 3001 9.12      
7 A 3007 2935 38.54      
8 A 1722 1681 42.66      
9 A 1627 1588 161.93      
10 A 1520 1483 6.40      
11 A 1415 1381 7.30      
12 A 1400 1366 5.99      
13 A 1373 1340 15.29      
14 A 1360 1327 26.07      
15 A 1282 1251 19.34      
16 A 1241 1211 7.21      
17 A 1151 1124 15.03      
18 A 1124 1097 15.48      
19 A 1088 1062 222.78      
20 A 1019 995 76.71      
21 A 978 955 55.68      
22 A 965 942 63.30      
23 A 790 771 111.60      
24 A 739 721 169.91      
25 A 693 677 19.17      
26 A 592 578 142.44      
27 A 574 560 25.29      
28 A 476 464 103.23      
29 A 454 443 75.52      
30 A 420 410 119.27      
31 A 279 272 18.24      
32 A 261 255 27.72      
33 A 252 246 14.75      
34 A 190 186 0.09      
35 A 140 136 7.06      
36 A 44 43 1.98      

Unscaled Zero Point Vibrational Energy (zpe) 24321.4 cm-1
Scaled (by 0.976) Zero Point Vibrational Energy (zpe) 23737.7 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at MP2/CEP-121G
ABC
0.10696 0.07346 0.05132

See section I.F.4 to change rotational constant units
Geometric Data calculated at MP2/CEP-121G

Point Group is C1

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
C1 0.794 -0.561 0.014
O2 2.118 -0.381 -0.382
O3 0.392 -1.605 0.580
C4 -0.079 0.685 -0.311
C5 -1.537 0.474 0.195
O6 -2.193 -0.685 -0.401
N7 0.478 1.963 0.232
H8 2.692 -1.157 -0.187
H9 -0.118 0.770 -1.409
H10 -1.531 0.411 1.301
H11 -2.114 1.358 -0.091
H12 -1.824 -1.527 -0.065
H13 1.369 2.232 -0.189
H14 0.578 1.957 1.251

Atom - Atom Distances (Å)
  C1 O2 O3 C4 C5 O6 N7 H8 H9 H10 H11 H12 H13 H14
C11.39411.25331.55612.55653.01802.55321.99942.15072.83003.48612.79092.85942.8144
O21.39412.32462.44303.79774.32202.92610.98432.71584.09634.58514.11712.72533.2415
O31.25332.32462.50212.86122.91363.58522.46583.13892.87773.93832.30894.03333.6290
C41.55612.44302.50211.55812.52141.49543.32941.10112.18742.15512.82852.12192.1191
C52.55653.79772.86121.55811.45922.50534.54822.16221.10701.09472.03793.41802.7907
O63.01804.32202.91362.52141.45923.81384.91232.72782.12952.06870.97864.60904.1702
N72.55322.92613.58521.49542.50533.81383.84832.11412.75412.68084.19081.02201.0241
H81.99940.98432.46583.32944.54824.91233.84833.61874.74445.42534.53223.63804.0291
H92.15072.71583.13891.10112.16222.72782.11413.61873.07702.46363.16072.41542.9948
H102.83004.09632.87772.18741.10702.12952.75414.74443.07701.78152.38933.73462.6158
H113.48614.58513.93832.15511.09472.06872.68085.42532.46361.78152.90033.59213.0673
H122.79094.11712.30892.82852.03790.97864.19084.53223.16072.38932.90034.93344.4318
H132.85942.72534.03332.12193.41804.60901.02203.63802.41543.73463.59214.93341.6663
H142.81443.24153.62902.11912.79074.17021.02414.02912.99482.61583.06734.43181.6663

picture of Serine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
C1 O2 H8 113.294 C1 C4 C5 110.350
C1 C4 N7 113.567 C1 C4 H9 106.817
O2 C1 O3 122.740 O2 C1 C4 111.688
O3 C1 C4 125.562 C4 C5 O6 113.325
C4 C5 H10 109.146 C4 C5 H11 107.369
C4 N7 H13 113.554 C4 N7 H14 113.174
C5 C4 N7 110.241 C5 C4 H9 107.552
C5 O6 H12 111.924 O6 C5 H10 111.424
O6 C5 H11 107.327 N7 C4 H9 108.056
H10 C5 H11 108.022 H13 N7 H14 109.053
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability