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All results from a given calculation for C5H4N4 (purine)

using model chemistry: MP2/6-31G

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at MP2/6-31G
 hartrees
Energy at 0K-410.128961
Energy at 298.15K-410.136472
HF Energy-409.248439
Nuclear repulsion energy404.690722
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at MP2/6-31G
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3663 3505 107.42      
2 A' 3297 3155 0.85      
3 A' 3256 3116 13.82      
4 A' 3223 3084 8.01      
5 A' 1608 1539 50.23      
6 A' 1571 1504 17.93      
7 A' 1464 1401 50.58      
8 A' 1449 1386 0.63      
9 A' 1410 1349 6.23      
10 A' 1405 1345 41.80      
11 A' 1334 1276 12.34      
12 A' 1293 1237 73.87      
13 A' 1258 1203 6.81      
14 A' 1228 1175 67.82      
15 A' 1176 1125 1.30      
16 A' 1088 1041 12.51      
17 A' 1072 1026 4.57      
18 A' 937 896 0.30      
19 A' 895 856 12.80      
20 A' 780 746 8.49      
21 A' 653 624 0.55      
22 A' 561 537 2.63      
23 A' 429 410 15.81      
24 A" 925 885 0.63      
25 A" 858 821 23.33      
26 A" 798 763 17.24      
27 A" 661 633 4.35      
28 A" 635 608 0.00      
29 A" 578 553 127.15      
30 A" 512 490 77.47      
31 A" 394 377 0.10      
32 A" 230 220 2.13      
33 A" 199 190 1.66      

Unscaled Zero Point Vibrational Energy (zpe) 20418.9 cm-1
Scaled (by 0.9568) Zero Point Vibrational Energy (zpe) 19536.8 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at MP2/6-31G
ABC
0.13273 0.05637 0.03956

See section I.F.4 to change rotational constant units
Geometric Data calculated at MP2/6-31G

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.836 -1.298 0.000
C2 -2.160 0.051 0.000
N3 -1.306 1.105 0.000
C4 0.000 0.716 0.000
C5 0.462 -0.635 0.000
C6 -0.526 -1.646 0.000
N7 1.873 -0.687 0.000
C8 2.225 0.609 0.000
N9 1.138 1.506 0.000
H10 -3.220 0.278 0.000
H11 -0.283 -2.707 0.000
H12 3.250 0.953 0.000
H13 1.166 2.518 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.38652.46072.72552.39251.35573.75934.48654.08732.09722.09775.56184.8548
C21.38651.35722.26062.71082.35564.10044.42063.60531.08393.33615.48474.1413
N32.46071.35721.36292.48102.85983.65003.56562.47712.08503.94734.55832.8471
C42.72552.26061.36291.42802.42042.34092.22731.38513.24983.43503.25822.1457
C52.39252.71082.48101.42801.41441.41172.15722.24443.79402.20223.20783.2299
C61.35572.35562.85982.42041.41442.58373.55743.56423.31061.08854.58414.4944
N73.75934.10043.65002.34091.41172.58371.34382.31295.18402.95392.14183.2824
C84.48654.42063.56562.22732.15723.55741.34381.40835.45494.15761.08102.1824
N94.08733.60532.47711.38512.24443.56422.31291.40834.52794.44572.18231.0125
H102.09721.08392.08503.24983.79403.31065.18405.45494.52794.18816.50484.9246
H112.09773.33613.94733.43502.20221.08852.95394.15764.44574.18815.08675.4217
H125.56185.48474.55833.25823.20784.58412.14181.08102.18236.50485.08672.6056
H134.85484.14132.84712.14573.22994.49443.28242.18241.01254.92465.42172.6056

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 127.485 N1 C2 H10 115.640
N1 C6 C5 119.451 N1 C6 H11 117.826
C2 N1 C6 118.410 C2 N3 C4 112.420
N3 C2 H10 116.875 N3 C4 C5 125.476
N3 C4 N9 128.689 C4 C5 C6 116.757
C4 C5 N7 111.043 C4 N9 C8 105.752
C4 N9 H13 126.287 C5 C4 N9 105.835
C5 C6 H11 122.723 C5 N7 C8 103.022
C6 C5 N7 132.199 N7 C8 N9 114.348
N7 C8 H12 123.722 C8 N9 H13 127.961
N9 C8 H12 121.930
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability