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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: B3LYP/CEP-31G*

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at B3LYP/CEP-31G*
 hartrees
Energy at 0K-45.616587
Energy at 298.15K-45.629221
Nuclear repulsion energy134.271317
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at B3LYP/CEP-31G*
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3104 2997 64.15      
2 A' 3063 2958 59.74      
3 A' 3043 2939 36.22      
4 A' 3035 2931 39.55      
5 A' 3030 2926 38.49      
6 A' 3019 2915 12.76      
7 A' 2648 2557 30.41      
8 A' 1510 1458 9.11      
9 A' 1502 1450 0.22      
10 A' 1490 1439 0.53      
11 A' 1486 1435 2.13      
12 A' 1483 1432 0.79      
13 A' 1411 1362 3.08      
14 A' 1403 1355 0.95      
15 A' 1363 1316 13.40      
16 A' 1294 1250 13.60      
17 A' 1233 1190 21.19      
18 A' 1128 1090 5.01      
19 A' 1059 1023 0.30      
20 A' 1052 1016 0.96      
21 A' 1020 985 0.31      
22 A' 897 866 1.03      
23 A' 861 831 2.00      
24 A' 726 701 6.00      
25 A' 426 412 1.61      
26 A' 338 326 0.30      
27 A' 239 231 1.37      
28 A' 112 108 1.05      
29 A" 3125 3018 87.37      
30 A" 3107 3000 109.64      
31 A" 3088 2982 22.12      
32 A" 3069 2964 9.86      
33 A" 3045 2940 1.79      
34 A" 1498 1447 8.47      
35 A" 1326 1280 0.08      
36 A" 1321 1275 1.08      
37 A" 1274 1230 0.43      
38 A" 1193 1152 0.25      
39 A" 1065 1029 3.33      
40 A" 946 914 0.26      
41 A" 821 793 3.07      
42 A" 742 717 0.49      
43 A" 713 689 7.96      
44 A" 235 227 0.07      
45 A" 196 189 22.20      
46 A" 134 130 1.02      
47 A" 92 89 2.44      
48 A" 59 57 1.84      

Unscaled Zero Point Vibrational Energy (zpe) 35010.1 cm-1
Scaled (by 0.9657) Zero Point Vibrational Energy (zpe) 33809.3 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at B3LYP/CEP-31G*
ABC
0.46542 0.02603 0.02524

See section I.F.4 to change rotational constant units
Geometric Data calculated at B3LYP/CEP-31G*

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -1.429 3.140 0.000
H2 -2.780 3.319 0.000
C3 -1.453 1.278 0.000
H4 -1.990 0.927 0.896
H5 -1.990 0.927 -0.896
C6 0.000 0.750 0.000
H7 0.531 1.139 -0.888
H8 0.531 1.139 0.888
C9 0.050 -0.799 0.000
H10 -0.489 -1.185 0.887
H11 -0.489 -1.185 -0.887
C12 1.497 -1.352 0.000
H13 2.036 -0.967 0.886
H14 2.036 -0.967 -0.886
C15 1.539 -2.900 0.000
H16 1.031 -3.310 0.892
H17 1.031 -3.310 -0.892
H18 2.577 -3.275 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.36271.86232.45252.45252.78462.93802.93804.20754.51444.51445.36115.44565.44566.72946.96056.96057.5631
H21.36272.43422.67332.67333.78484.06174.06174.99635.13055.13056.33316.50696.50697.57097.69787.69788.4954
C31.86232.43421.10201.10201.54562.17732.17732.56362.78992.78993.95214.24194.24195.13835.29285.29286.0802
H42.45252.67331.10201.79212.18933.09492.52912.81842.59153.14554.26114.44894.79245.28195.20375.50236.2704
H52.45252.67331.10201.79212.18932.52913.09492.81843.14552.59154.26114.79244.44895.28195.50235.20376.2704
C62.78463.78481.54562.18932.18931.10501.10501.54972.18422.18422.58082.80662.80663.96084.28274.28274.7793
H72.93804.06172.17733.09492.52911.10501.77572.18503.09682.53792.81573.13782.58844.25614.81764.47684.9455
H82.93804.06172.17732.52913.09491.10501.77572.18502.53793.09682.81572.58843.13784.25614.47684.81764.9455
C94.20754.99632.56362.81842.81841.54972.18502.18501.10721.10721.54922.18092.18092.57482.83952.83953.5379
H104.51445.13052.78992.59153.14552.18423.09682.53791.10721.77332.18132.53413.09252.79932.61223.16023.8148
H114.51445.13052.78993.14552.59152.18422.53793.09681.10721.77332.18133.09252.53412.79933.16022.61223.8148
C125.36116.33313.95214.26114.26112.58082.81572.81571.54922.18132.18131.10611.10611.54812.20122.20122.2053
H135.44566.50694.24194.44894.79242.80663.13782.58842.18092.53413.09251.10611.77172.18362.54943.10802.5309
H145.44566.50694.24194.79244.44892.80662.58843.13782.18093.09252.53411.10611.77172.18363.10802.54942.5309
C156.72947.57095.13835.28195.28193.96084.25614.25612.57482.79932.79931.54812.18362.18361.10511.10511.1041
H166.96057.69785.29285.20375.50234.28274.81764.47682.83952.61223.16022.20122.54943.10801.10511.78371.7852
H176.96057.69785.29285.50235.20374.28274.47684.81762.83953.16022.61222.20123.10802.54941.10511.78371.7852
H187.56318.49546.08026.27046.27044.77934.94554.94553.53793.81483.81482.20532.53092.53091.10411.78521.7852

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 108.941 S1 C3 H5 108.941
S1 C3 C6 109.239 H2 S1 C3 96.793
C3 C6 H7 109.332 C3 C6 H8 109.332
C3 C6 C9 111.831 H4 C3 H5 108.804
H4 C3 C6 110.441 H5 C3 C6 110.441
C6 C9 H10 109.457 C6 C9 H11 109.457
C6 C9 C12 112.776 H7 C6 H8 106.927
H7 C6 C9 109.647 H8 C6 C9 109.647
C9 C12 H13 109.298 C9 C12 H14 109.298
C9 C12 C15 112.462 H10 C9 H11 106.416
H10 C9 C12 109.268 H11 C9 C12 109.268
C12 C15 H16 111.019 C12 C15 H17 111.019
C12 C15 H18 111.406 H13 C12 H14 106.430
H13 C12 C15 109.585 H14 C12 C15 109.585
H16 C15 H17 107.605 H16 C15 H18 107.812
H17 C15 H18 107.812
Electronic energy levels

Electronic state

Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at B3LYP/CEP-31G* Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S -0.181      
2 H 0.117      
3 C -0.299      
4 H 0.162      
5 H 0.162      
6 C -0.233      
7 H 0.134      
8 H 0.134      
9 C -0.315      
10 H 0.112      
11 H 0.112      
12 C -0.158      
13 H 0.116      
14 H 0.116      
15 C -0.417      
16 H 0.131      
17 H 0.131      
18 H 0.175      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  -0.644 -1.762 0.000 1.876
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -41.863 -1.022 0.000
y -1.022 -54.114 0.000
z 0.000 0.000 -46.928
Traceless
 xyz
x 8.658 -1.022 0.000
y -1.022 -9.719 0.000
z 0.000 0.000 1.061
Polar
3z2-r22.122
x2-y212.251
xy-1.022
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 10.262 -2.036 0.000
y -2.036 13.640 0.000
z 0.000 0.000 7.709


<r2> (average value of r2) Å2
<r2> 274.634
(<r2>)1/2 16.572