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All results from a given calculation for C5H4N4 (purine)

using model chemistry: CBS-Q

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at CBS-Q
 hartrees
Energy at 0K-411.297423
Energy at 298.15K-411.290771
HF Energy-409.468967
Nuclear repulsion energy416.563761
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at CBS-Q
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3917 3917 120.97      
2 A' 3428 3428 3.78      
3 A' 3381 3381 24.32      
4 A' 3371 3371 19.26      
5 A' 1834 1834 121.90      
6 A' 1803 1803 167.69      
7 A' 1720 1720 43.27      
8 A' 1627 1627 11.25      
9 A' 1560 1560 18.42      
10 A' 1557 1557 126.62      
11 A' 1491 1491 70.20      
12 A' 1425 1425 23.71      
13 A' 1405 1405 7.00      
14 A' 1309 1309 6.83      
15 A' 1274 1274 47.12      
16 A' 1229 1229 8.94      
17 A' 1167 1167 27.28      
18 A' 1022 1022 1.20      
19 A' 987 987 18.24      
20 A' 871 871 22.55      
21 A' 712 712 0.10      
22 A' 615 615 3.28      
23 A' 480 480 13.07      
24 A" 1126 1126 0.48      
25 A" 1065 1065 3.52      
26 A" 1020 1020 2.00      
27 A" 895 895 19.03      
28 A" 720 720 18.95      
29 A" 670 670 19.60      
30 A" 554 554 141.30      
31 A" 462 462 16.83      
32 A" 276 276 0.02      
33 A" 253 253 6.55      

Unscaled Zero Point Vibrational Energy (zpe) 22612.7 cm-1
Scaled (by 1) Zero Point Vibrational Energy (zpe) 22612.7 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at CBS-Q
ABC
0.13624 0.05839 0.04087

See section I.F.4 to change rotational constant units
Geometric Data calculated at CBS-Q

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.805 -1.242 0.000
C2 -2.094 0.068 0.000
N3 -1.267 1.085 0.000
C4 0.000 0.695 0.000
C5 0.444 -0.618 0.000
C6 -0.541 -1.596 0.000
N7 1.826 -0.674 0.000
C8 2.178 0.562 0.000
N9 1.127 1.453 0.000
H10 -3.145 0.306 0.000
H11 -0.323 -2.653 0.000
H12 3.202 0.886 0.000
H13 1.174 2.444 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.34122.38862.64812.33461.31263.67564.37263.98252.04742.04675.44094.7394
C21.34121.31162.18642.62982.27603.99044.30103.50651.07733.24685.35954.0409
N32.38861.31161.32522.41432.77763.55853.48442.42162.03353.85554.47342.7934
C42.64812.18641.32521.38662.35452.28302.18231.35793.16903.36383.20802.1062
C52.33462.62982.41431.38661.38851.38302.09692.18063.70652.17473.14123.1479
C61.31262.27602.77762.35451.38852.54063.47133.47553.22461.07934.49154.3891
N73.67563.99043.55852.28301.38302.54061.28512.23965.06712.92102.08033.1861
C84.37264.30103.48442.18232.09693.47131.28511.37855.32934.07271.07432.1338
N93.98253.50652.42161.35792.18063.47552.23961.37854.42314.35432.15160.9922
H102.04741.07732.03353.16903.70653.22465.06715.32934.42314.08936.37374.8190
H112.04673.24683.85553.36382.17471.07932.92104.07274.35434.08934.99485.3122
H125.44095.35954.47343.20803.14124.49152.08031.07432.15166.37374.99482.5580
H134.73944.04092.79342.10623.14794.38913.18612.13380.99224.81905.31222.5580

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 128.418 N1 C2 H10 115.238
N1 C6 C5 119.578 N1 C6 H11 117.337
C2 N1 C6 118.098 C2 N3 C4 112.028
N3 C2 H10 116.344 N3 C4 C5 125.799
N3 C4 N9 128.981 C4 C5 C6 116.079
C4 C5 N7 111.034 C4 N9 C8 105.786
C4 N9 H13 126.632 C5 C4 N9 105.221
C5 C6 H11 123.085 C5 N7 C8 103.551
C6 C5 N7 132.887 N7 C8 N9 114.408
N7 C8 H12 123.459 C8 N9 H13 127.582
N9 C8 H12 122.133
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability