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All results from a given calculation for C5H4N4 (purine)

using model chemistry: G4

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at G4
 hartrees
Energy at 0K-411.760501
Energy at 298.15K-411.753801
HF Energy-411.971097
Nuclear repulsion energy412.745232
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at B3LYP/6-31G(2df,p)
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3662 3534 83.77      
2 A' 3243 3129 0.68      
3 A' 3176 3065 16.30      
4 A' 3164 3054 15.91      
5 A' 1650 1593 65.92      
6 A' 1612 1556 75.10      
7 A' 1524 1471 23.64      
8 A' 1483 1431 3.34      
9 A' 1428 1378 47.69      
10 A' 1412 1363 23.11      
11 A' 1367 1319 56.53      
12 A' 1316 1270 26.74      
13 A' 1295 1250 2.24      
14 A' 1278 1233 50.80      
15 A' 1204 1162 6.76      
16 A' 1133 1094 5.26      
17 A' 1082 1044 13.92      
18 A' 945 912 1.98      
19 A' 910 878 13.36      
20 A' 807 778 15.00      
21 A' 660 636 0.55      
22 A' 570 550 3.89      
23 A' 445 430 11.60      
24 A" 1005 970 0.53      
25 A" 953 920 5.22      
26 A" 885 854 3.43      
27 A" 833 804 9.53      
28 A" 669 646 7.75      
29 A" 628 606 19.65      
30 A" 531 513 91.58      
31 A" 424 409 3.78      
32 A" 249 240 0.55      
33 A" 236 228 3.81      

Unscaled Zero Point Vibrational Energy (zpe) 20888.2 cm-1
Scaled (by 0.965) Zero Point Vibrational Energy (zpe) 20157.1 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at B3LYP/6-31G(2df,p)
ABC
0.13828 0.05858 0.04115

See section I.F.4 to change rotational constant units
Geometric Data calculated at B3LYP/6-31G(2df,p)

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.817 -1.253 0.000
C2 -2.102 0.068 0.000
N3 -1.270 1.100 0.000
C4 0.000 0.703 0.000
C5 0.451 -0.627 0.000
C6 -0.541 -1.607 0.000
N7 1.833 -0.690 0.000
C8 2.184 0.568 0.000
N9 1.130 1.466 0.000
H10 -3.159 0.308 0.000
H11 -0.314 -2.669 0.000
H12 3.210 0.902 0.000
H13 1.174 2.471 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.35162.41652.66952.35211.32423.69314.39564.00932.05882.06465.46874.7768
C21.35161.32642.19582.64532.28994.00764.31493.52111.08373.26925.37664.0633
N32.41651.32641.33042.43762.80403.58243.49432.42702.04873.88884.48362.8020
C42.66952.19581.33041.40362.37212.30232.18801.36333.18333.38643.21582.1229
C52.35212.64532.43761.40361.39401.38422.10522.20003.72822.18093.15413.1814
C61.32422.28992.80402.37211.39402.54483.48613.49753.24381.08604.51194.4242
N73.69314.00763.58242.30231.38422.54481.30592.26775.09082.92022.10423.2292
C84.39564.31493.49432.18802.10523.48611.30591.38475.34894.08881.07862.1545
N94.00933.52112.42701.36332.20003.49752.26771.38474.44204.37972.15501.0064
H102.05881.08372.04873.18333.72823.24385.09085.34894.44204.11776.39594.8430
H112.06463.26923.88883.38642.18091.08602.92024.08884.37974.11775.01665.3515
H125.46875.37664.48363.21583.15414.51192.10421.07862.15506.39595.01662.5703
H134.77684.06332.80202.12293.18144.42423.22922.15451.00644.84305.35152.5703

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 127.657 N1 C2 H10 115.717
N1 C6 C5 119.941 N1 C6 H11 118.083
C2 N1 C6 118.223 C2 N3 C4 112.783
N3 C2 H10 116.626 N3 C4 C5 125.529
N3 C4 N9 129.044 C4 C5 C6 115.867
C4 C5 N7 110.144 C4 N9 C8 106.173
C4 N9 H13 126.436 C5 C4 N9 105.427
C5 C6 H11 121.976 C5 N7 C8 104.621
C6 C5 N7 133.989 N7 C8 N9 113.635
N7 C8 H12 125.161 C8 N9 H13 127.391
N9 C8 H12 121.204
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at B3LYP/6-31G(2df,p) Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 N -0.260      
2 C 0.056      
3 N -0.353      
4 C 0.410      
5 C 0.213      
6 C -0.067      
7 N -0.328      
8 C 0.021      
9 N -0.371      
10 H 0.120      
11 H 0.130      
12 H 0.148      
13 H 0.280      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  2.160 2.897 0.000 3.614
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 0.000 0.000 0.000
y 0.000 0.000 0.000
z 0.000 0.000 0.000


<r2> (average value of r2) Å2
<r2> 253.351
(<r2>)1/2 15.917