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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: wB97X-D/6-31G*

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at wB97X-D/6-31G*
 hartrees
Energy at 0K-595.876247
Energy at 298.15K-595.889138
HF Energy-595.876247
Nuclear repulsion energy 
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at wB97X-D/6-31G*
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3148 2985 37.82      
2 A' 3089 2930 36.57      
3 A' 3064 2906 41.53      
4 A' 3063 2905 28.42      
5 A' 3055 2898 20.23      
6 A' 3042 2885 10.70      
7 A' 2818 2673 28.07      
8 A' 1539 1460 6.68      
9 A' 1531 1453 0.45      
10 A' 1522 1443 3.31      
11 A' 1520 1442 0.38      
12 A' 1516 1438 0.43      
13 A' 1454 1380 4.13      
14 A' 1449 1374 0.77      
15 A' 1411 1338 11.29      
16 A' 1345 1276 12.58      
17 A' 1281 1215 14.74      
18 A' 1162 1103 4.65      
19 A' 1095 1038 0.23      
20 A' 1086 1031 0.75      
21 A' 1053 999 0.56      
22 A' 931 883 0.65      
23 A' 898 852 2.71      
24 A' 764 724 3.68      
25 A' 449 426 1.52      
26 A' 358 339 0.42      
27 A' 254 241 1.39      
28 A' 122 116 1.24      
29 A" 3148 2986 34.62      
30 A" 3138 2977 53.47      
31 A" 3111 2951 33.82      
32 A" 3096 2937 7.78      
33 A" 3075 2917 2.05      
34 A" 1534 1455 8.02      
35 A" 1362 1292 0.65      
36 A" 1360 1290 0.46      
37 A" 1313 1245 0.29      
38 A" 1243 1179 0.13      
39 A" 1113 1056 1.83      
40 A" 987 936 0.05      
41 A" 858 813 1.76      
42 A" 768 729 0.10      
43 A" 738 700 4.62      
44 A" 234 222 0.30      
45 A" 215 204 22.32      
46 A" 149 141 1.48      
47 A" 91 87 0.30      
48 A" 57 54 2.73      

Unscaled Zero Point Vibrational Energy (zpe) 35803.1 cm-1
Scaled (by 0.9485) Zero Point Vibrational Energy (zpe) 33959.3 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at wB97X-D/6-31G*
ABC
0.47897 0.02664 0.02584

See section I.F.4 to change rotational constant units
Geometric Data calculated at wB97X-D/6-31G*

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -2.449 1.632 0.000
H2 -3.679 1.089 0.000
C3 -1.498 0.064 0.000
H4 -1.765 -0.518 0.887
H5 -1.765 -0.518 -0.887
C6 0.000 0.363 0.000
H7 0.251 0.968 -0.881
H8 0.251 0.968 0.881
C9 0.844 -0.914 0.000
H10 0.588 -1.521 0.879
H11 0.588 -1.521 -0.879
C12 2.350 -0.638 0.000
H13 2.605 -0.031 0.878
H14 2.605 -0.031 -0.878
C15 3.187 -1.917 0.000
H16 2.971 -2.527 0.885
H17 2.971 -2.527 -0.885
H18 4.259 -1.694 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.34461.83332.42412.42412.75802.91652.91654.16244.46514.46515.30825.39255.39256.66006.88896.88897.4871
H21.34462.40912.65152.65153.74954.02924.02924.94665.07825.07826.27076.44306.44307.49477.62107.62108.4114
C31.83332.40911.09421.09421.52782.15722.15722.53872.76392.76393.91154.19764.19765.08695.24175.24176.0198
H42.42412.65151.09421.77462.16303.06582.50472.78452.55793.10874.21094.39744.73865.22195.14505.44166.2016
H52.42412.65151.09421.77462.16302.50473.06582.78453.10872.55794.21094.73864.39745.22195.44165.14506.2016
C62.75803.74951.52782.16302.16301.09771.09771.53072.16092.16092.55402.77742.77743.91854.23834.23834.7298
H72.91654.02922.15723.06582.50471.09771.76132.16083.06732.51212.78543.10382.55724.20914.76764.42874.8913
H82.91654.02922.15722.50473.06581.09771.76132.16082.51213.06732.78542.55723.10384.20914.42874.76764.8913
C94.16244.94662.53872.78452.78451.53072.16082.16081.09931.09931.53012.15672.15672.54832.81232.81233.5026
H104.46515.07822.76392.55793.10872.16093.06732.51211.09931.75892.15812.50833.06292.77242.58713.13143.7791
H114.46515.07822.76393.10872.55792.16092.51213.06731.09931.75892.15813.06292.50832.77243.13142.58713.7791
C125.30826.27073.91154.21094.21092.55402.78542.78541.53012.15812.15811.09801.09801.52842.17632.17632.1819
H135.39256.44304.19764.39744.73862.77743.10382.55722.15672.50833.06291.09801.75672.16012.52253.07762.5045
H145.39256.44304.19764.73864.39742.77742.55723.10382.15673.06292.50831.09801.75672.16013.07762.52252.5045
C156.66007.49475.08695.22195.22193.91854.20914.20912.54832.77242.77241.52842.16012.16011.09611.09611.0948
H166.88897.62105.24175.14505.44164.23834.76764.42872.81232.58713.13142.17632.52253.07761.09611.76971.7702
H176.88897.62105.24175.44165.14504.23834.42874.76762.81233.13142.58712.17633.07762.52251.09611.76971.7702
H187.48718.41146.01986.20166.20164.72984.89134.89133.50263.77913.77912.18192.50452.50451.09481.77021.7702

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 109.179 S1 C3 H5 109.179
S1 C3 C6 109.948 H2 S1 C3 97.397
C3 C6 H7 109.409 C3 C6 H8 109.409
C3 C6 C9 112.207 H4 C3 H5 108.369
H4 C3 C6 110.067 H5 C3 C6 110.067
C6 C9 H10 109.399 C6 C9 H11 109.399
C6 C9 C12 113.108 H7 C6 H8 106.698
H7 C6 C9 109.482 H8 C6 C9 109.482
C9 C12 H13 109.187 C9 C12 H14 109.187
C9 C12 C15 112.853 H10 C9 H11 106.264
H10 C9 C12 109.221 H11 C9 C12 109.221
C12 C15 H16 110.963 C12 C15 H17 110.963
C12 C15 H18 111.494 H13 C12 H14 106.248
H13 C12 C15 109.575 H14 C12 C15 109.575
H16 C15 H17 107.655 H16 C15 H18 107.800
H17 C15 H18 107.800
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at wB97X-D/6-31G* Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S -0.090      
2 H 0.100      
3 C -0.447      
4 H 0.191      
5 H 0.191      
6 C -0.310      
7 H 0.172      
8 H 0.172      
9 C -0.291      
10 H 0.151      
11 H 0.151      
12 C -0.295      
13 H 0.156      
14 H 0.156      
15 C -0.496      
16 H 0.161      
17 H 0.161      
18 H 0.166      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  0.350 -1.837 0.000 1.870
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -44.448 3.885 0.000
y 3.885 -51.424 0.000
z 0.000 0.000 -48.027
Traceless
 xyz
x 5.278 3.885 0.000
y 3.885 -5.187 0.000
z 0.000 0.000 -0.091
Polar
3z2-r2-0.181
x2-y26.977
xy3.885
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 12.304 -1.685 0.000
y -1.685 10.233 0.000
z 0.000 0.000 8.513


<r2> (average value of r2) Å2
<r2> 411.193
(<r2>)1/2 20.278