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All results from a given calculation for C5H4N4 (purine)

using model chemistry: MP3/6-31G*

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at MP3/6-31G*
 hartrees
Energy at 0K-410.745099
Energy at 298.15K-410.752925
HF Energy-409.467802
Nuclear repulsion energy412.386813
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at MP3/6-31G*
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3721 3493 116.80      
2 A' 3312 3109 0.80      
3 A' 3260 3060 16.23      
4 A' 3246 3047 9.60      
5 A' 1720 1614 60.26      
6 A' 1690 1586 70.86      
7 A' 1593 1496 29.97      
8 A' 1550 1455 19.77      
9 A' 1487 1395 91.66      
10 A' 1467 1377 8.60      
11 A' 1413 1326 61.41      
12 A' 1361 1278 14.29      
13 A' 1331 1250 6.44      
14 A' 1263 1186 59.31      
15 A' 1243 1167 3.52      
16 A' 1162 1091 8.38      
17 A' 1126 1057 13.21      
18 A' 968 909 0.20      
19 A' 936 879 15.12      
20 A' 824 774 14.24      
21 A' 672 631 0.35      
22 A' 581 545 3.41      
23 A' 448 420 13.74      
24 A" 996 935 0.03      
25 A" 929 872 13.50      
26 A" 885 831 9.98      
27 A" 749 703 6.89      
28 A" 670 629 4.78      
29 A" 616 578 32.63      
30 A" 494 464 123.19      
31 A" 418 392 7.23      
32 A" 248 232 0.09      
33 A" 229 215 4.52      

Unscaled Zero Point Vibrational Energy (zpe) 21305.6 cm-1
Scaled (by 0.9386) Zero Point Vibrational Energy (zpe) 19997.4 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at MP3/6-31G*
ABC
0.13787 0.05853 0.04109

See section I.F.4 to change rotational constant units
Geometric Data calculated at MP3/6-31G*

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.813 -1.259 0.000
C2 -2.101 0.065 0.000
N3 -1.273 1.101 0.000
C4 0.000 0.703 0.000
C5 0.451 -0.621 0.000
C6 -0.536 -1.609 0.000
N7 1.836 -0.689 0.000
C8 2.180 0.571 0.000
N9 1.127 1.466 0.000
H10 -3.158 0.302 0.000
H11 -0.308 -2.670 0.000
H12 3.206 0.905 0.000
H13 1.169 2.474 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.35542.42112.67152.35291.32413.69324.39224.00872.06052.06335.46574.7784
C21.35541.32572.19562.64302.29164.00824.31033.51851.08283.27095.37284.0616
N32.42111.32571.33432.43722.80833.58743.49352.42772.04653.89284.48362.8022
C42.67152.19561.33431.39842.37282.30332.18351.36093.18293.38683.21222.1226
C52.35292.64302.43721.39841.39691.38592.09922.19353.72522.18543.14883.1772
C61.32412.29162.80832.37281.39692.54403.48223.49573.24411.08564.50794.4248
N73.69324.00823.58742.30331.38592.54401.30552.26845.09062.91902.10163.2322
C84.39224.31033.49352.18352.09923.48221.30551.38225.34394.08541.07932.1549
N94.00873.51852.42771.36092.19353.49572.26841.38224.43954.37792.15371.0089
H102.06051.08282.04653.18293.72523.24415.09065.34394.43954.11796.39194.8413
H112.06333.27093.89283.38682.18541.08562.91904.08544.37794.11795.01265.3521
H125.46575.37284.48363.21223.14884.50792.10161.07932.15376.39195.01262.5711
H134.77844.06162.80222.12263.17724.42483.23222.15491.00894.84135.35212.5711

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 129.115 N1 C2 H10 114.897
N1 C6 C5 119.679 N1 C6 H11 117.454
C2 N1 C6 117.568 C2 N3 C4 111.256
N3 C2 H10 115.988 N3 C4 C5 126.202
N3 C4 N9 128.503 C4 C5 C6 116.179
C4 C5 N7 111.634 C4 N9 C8 105.497
C4 N9 H13 126.550 C5 C4 N9 105.296
C5 C6 H11 122.867 C5 N7 C8 102.474
C6 C5 N7 132.187 N7 C8 N9 115.100
N7 C8 H12 123.309 C8 N9 H13 127.953
N9 C8 H12 121.591
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability