return to home page Computational Chemistry Comparison and Benchmark DataBase Release 22 (May 2022) Standard Reference Database 101 National Institute of Standards and Technology
You are here: Calculated > Energy > Optimized > Energy

All results from a given calculation for HO2CCHNH2CH2OH (Serine)

using model chemistry: MP2/CEP-31G

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A
Energy calculated at MP2/CEP-31G
 hartrees
Energy at 0K-77.787227
Energy at 298.15K-77.796820
HF Energy-77.118534
Nuclear repulsion energy175.894619
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at MP2/CEP-31G
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A 3679 3555 19.23      
2 A 3672 3548 4.61      
3 A 3631 3509 44.37      
4 A 3537 3417 2.36      
5 A 3192 3084 27.84      
6 A 3134 3029 14.50      
7 A 3064 2961 54.51      
8 A 1712 1655 42.17      
9 A 1636 1580 150.73      
10 A 1523 1472 5.74      
11 A 1416 1368 6.37      
12 A 1403 1356 10.34      
13 A 1378 1332 10.72      
14 A 1361 1316 26.01      
15 A 1288 1245 19.75      
16 A 1244 1202 12.12      
17 A 1150 1111 18.71      
18 A 1135 1097 24.22      
19 A 1097 1060 215.56      
20 A 1024 990 73.54      
21 A 986 952 68.02      
22 A 965 932 50.46      
23 A 786 760 46.40      
24 A 707 683 242.86      
25 A 693 670 43.56      
26 A 599 579 162.05      
27 A 574 555 23.05      
28 A 478 462 102.97      
29 A 452 437 86.19      
30 A 421 407 122.02      
31 A 294 284 42.81      
32 A 271 262 21.33      
33 A 257 248 1.74      
34 A 190 183 0.06      
35 A 138 134 6.36      
36 A 44 43 2.09      

Unscaled Zero Point Vibrational Energy (zpe) 24564.6 cm-1
Scaled (by 0.9663) Zero Point Vibrational Energy (zpe) 23736.8 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at MP2/CEP-31G
ABC
0.10625 0.07266 0.05036

See section I.F.4 to change rotational constant units
Geometric Data calculated at MP2/CEP-31G

Point Group is C1

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
C1 0.809 -0.558 0.015
O2 2.127 -0.356 -0.384
O3 0.427 -1.610 0.577
C4 -0.085 0.680 -0.309
C5 -1.550 0.460 0.195
O6 -2.203 -0.699 -0.398
N7 0.455 1.967 0.233
H8 2.711 -1.125 -0.192
H9 -0.121 0.763 -1.411
H10 -1.556 0.404 1.305
H11 -2.130 1.346 -0.101
H12 -1.841 -1.543 -0.058
H13 1.347 2.244 -0.187
H14 0.557 1.966 1.254

Atom - Atom Distances (Å)
  C1 O2 O3 C4 C5 O6 N7 H8 H9 H10 H11 H12 H13 H14
C11.39141.25281.56142.57553.04402.55851.99512.15442.86073.50402.82872.86002.8227
O21.39142.32072.44423.81044.34382.92790.98462.71244.12244.59354.15482.72183.2463
O31.25282.32072.50862.88782.94983.59322.45783.14372.91873.96712.35684.03523.6415
C41.56142.44422.50861.56412.52891.49653.33051.10622.20052.16042.84402.12392.1231
C52.57553.81042.88781.56411.45652.50774.56232.17111.11141.09982.03953.42322.7981
O63.04404.34382.94982.52891.45653.81674.93692.73862.12972.06730.97944.61604.1775
N72.55852.92793.59321.49652.50773.81673.85112.11762.76262.67934.20371.02441.0261
H81.99510.98462.45783.33054.56234.93693.85113.61484.77325.43604.57323.63494.0350
H92.15442.71243.14371.10622.17112.73862.11763.61483.09292.46893.17922.41793.0019
H102.86074.12242.91872.20051.11142.12972.76264.77323.09291.78722.39343.74652.6282
H113.50404.59353.96712.16041.09982.06732.67935.43602.46891.78722.90333.59213.0733
H122.82874.15482.35682.84402.03950.97944.20374.57323.17922.39342.90334.95184.4480
H132.86002.72184.03522.12393.42324.61601.02443.63492.41793.74653.59214.95181.6664
H142.82273.24633.64152.12312.79814.17751.02614.03503.00192.62823.07334.44801.6664

picture of Serine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
C1 O2 H8 113.091 C1 C4 C5 110.981
C1 C4 N7 113.565 C1 C4 H9 106.473
O2 C1 O3 122.636 O2 C1 C4 111.610
O3 C1 C4 125.748 C4 C5 O6 113.648
C4 C5 H10 109.499 C4 C5 H11 107.101
C4 N7 H13 113.488 C4 N7 H14 113.305
C5 C4 N7 110.021 C5 C4 H9 107.557
C5 O6 H12 112.222 O6 C5 H10 111.358
O6 C5 H11 107.115 N7 C4 H9 107.962
H10 C5 H11 107.844 H13 N7 H14 108.720
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability