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All results from a given calculation for C5H4N4 (purine)

using model chemistry: MP2/CEP-121G*

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at MP2/CEP-121G*
 hartrees
Energy at 0K-69.785593
Energy at 298.15K-69.793252
HF Energy-68.498723
Nuclear repulsion energy204.025879
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at MP2/CEP-121G*
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3646 3473 103.30      
2 A' 3275 3120 0.72      
3 A' 3230 3078 14.17      
4 A' 3210 3058 9.72      
5 A' 1637 1560 44.09      
6 A' 1612 1535 36.20      
7 A' 1495 1425 25.80      
8 A' 1485 1415 17.92      
9 A' 1438 1370 67.85      
10 A' 1414 1348 7.26      
11 A' 1382 1316 70.74      
12 A' 1332 1269 38.09      
13 A' 1318 1256 8.51      
14 A' 1272 1212 30.78      
15 A' 1196 1140 5.10      
16 A' 1109 1057 10.43      
17 A' 1093 1042 7.07      
18 A' 932 888 0.11      
19 A' 904 862 12.52      
20 A' 789 752 10.22      
21 A' 649 618 0.47      
22 A' 560 534 3.33      
23 A' 433 412 15.08      
24 A" 933 889 0.11      
25 A" 886 844 23.05      
26 A" 850 810 16.97      
27 A" 748 713 5.68      
28 A" 652 621 0.67      
29 A" 602 574 35.29      
30 A" 484 461 98.51      
31 A" 406 387 2.09      
32 A" 232 221 1.37      
33 A" 221 210 3.36      

Unscaled Zero Point Vibrational Energy (zpe) 20711.6 cm-1
Scaled (by 0.9528) Zero Point Vibrational Energy (zpe) 19734.0 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at MP2/CEP-121G*
ABC
0.13469 0.05775 0.04042

See section I.F.4 to change rotational constant units
Geometric Data calculated at MP2/CEP-121G*

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.827 -1.273 0.000
C2 -2.121 0.064 0.000
N3 -1.284 1.114 0.000
C4 0.000 0.712 0.000
C5 0.459 -0.630 0.000
C6 -0.535 -1.629 0.000
N7 1.849 -0.700 0.000
C8 2.195 0.583 0.000
N9 1.134 1.484 0.000
H10 -3.181 0.300 0.000
H11 -0.305 -2.693 0.000
H12 3.223 0.921 0.000
H13 1.173 2.499 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.36922.44782.69732.37411.33953.72004.42894.04592.07572.08075.50574.8198
C21.36921.34242.21782.67162.31954.04294.34693.55161.08573.30105.41234.0968
N32.44781.34241.34602.46582.84293.62053.51962.44692.06363.93064.51152.8214
C42.69732.21781.34601.41792.40062.32612.19861.37233.20733.41823.22982.1382
C52.37412.67162.46581.41791.40891.39202.11752.21953.75652.19993.16973.2097
C61.33952.31952.84292.40061.40892.55873.51303.53213.27401.08884.54144.4673
N73.72004.04293.62052.32611.39202.55871.32812.29795.12822.93502.12493.2694
C84.42894.34693.51962.19862.11753.51301.32811.39205.38304.12061.08252.1717
N94.04593.55162.44691.37232.21953.53212.29791.39204.47464.41822.16321.0157
H102.07571.08572.06363.20733.75653.27405.12825.38304.47464.15036.43384.8781
H112.08073.30103.93063.41822.19991.08882.93504.12064.41824.15035.05095.3985
H125.50575.41234.51153.22983.16974.54142.12491.08252.16326.43385.05092.5865
H134.81984.09682.82142.13823.20974.46733.26942.17171.01574.87815.39852.5865

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 129.027 N1 C2 H10 114.979
N1 C6 C5 119.478 N1 C6 H11 117.565
C2 N1 C6 117.810 C2 N3 C4 111.165
N3 C2 H10 115.995 N3 C4 C5 126.265
N3 C4 N9 128.355 C4 C5 C6 116.255
C4 C5 N7 111.751 C4 N9 C8 105.371
C4 N9 H13 126.471 C5 C4 N9 105.380
C5 C6 H11 122.957 C5 N7 C8 102.219
C6 C5 N7 131.994 N7 C8 N9 115.278
N7 C8 H12 123.325 C8 N9 H13 128.158
N9 C8 H12 121.397
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability