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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: B3LYP/aug-cc-pVTZ

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at B3LYP/aug-cc-pVTZ
 hartrees
Energy at 0K-596.070236
Energy at 298.15K-596.083074
HF Energy-596.070236
Nuclear repulsion energy286.707167
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at B3LYP/aug-cc-pVTZ
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3085 2985 39.22      
2 A' 3051 2951 33.26      
3 A' 3022 2924 45.91      
4 A' 3018 2920 33.56      
5 A' 3009 2912 14.77      
6 A' 2998 2901 6.26      
7 A' 2676 2589 4.54      
8 A' 1515 1465 8.61      
9 A' 1504 1455 0.18      
10 A' 1493 1444 1.73      
11 A' 1488 1440 1.38      
12 A' 1486 1437 0.38      
13 A' 1419 1373 2.01      
14 A' 1401 1355 0.24      
15 A' 1378 1333 7.07      
16 A' 1314 1271 5.56      
17 A' 1248 1208 18.63      
18 A' 1136 1099 2.78      
19 A' 1063 1028 0.23      
20 A' 1054 1020 0.80      
21 A' 1020 986 0.18      
22 A' 906 876 0.48      
23 A' 859 831 0.69      
24 A' 727 704 4.80      
25 A' 438 424 1.23      
26 A' 347 335 0.23      
27 A' 246 238 0.95      
28 A' 118 114 0.96      
29 A" 3099 2998 20.70      
30 A" 3080 2980 58.98      
31 A" 3054 2955 32.84      
32 A" 3037 2938 4.74      
33 A" 3017 2919 0.84      
34 A" 1502 1453 6.98      
35 A" 1337 1294 0.29      
36 A" 1333 1290 0.42      
37 A" 1288 1247 0.11      
38 A" 1225 1185 0.19      
39 A" 1081 1046 1.58      
40 A" 968 936 0.08      
41 A" 846 818 1.36      
42 A" 762 737 0.08      
43 A" 734 710 3.94      
44 A" 246 238 0.01      
45 A" 184 178 10.82      
46 A" 145 140 1.18      
47 A" 99 96 1.82      
48 A" 65 62 1.81      

Unscaled Zero Point Vibrational Energy (zpe) 35059.7 cm-1
Scaled (by 0.9675) Zero Point Vibrational Energy (zpe) 33920.3 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at B3LYP/aug-cc-pVTZ
ABC
0.47958 0.02651 0.02572

See section I.F.4 to change rotational constant units
Geometric Data calculated at B3LYP/aug-cc-pVTZ

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -2.426 1.669 0.000
H2 -3.664 1.144 0.000
C3 -1.499 0.076 0.000
H4 -1.782 -0.493 0.885
H5 -1.782 -0.493 -0.885
C6 0.000 0.356 0.000
H7 0.255 0.957 -0.876
H8 0.255 0.957 0.876
C9 0.833 -0.928 0.000
H10 0.571 -1.531 0.876
H11 0.571 -1.531 -0.876
C12 2.340 -0.670 0.000
H13 2.601 -0.067 0.874
H14 2.601 -0.067 -0.874
C15 3.168 -1.954 0.000
H16 2.953 -2.562 0.881
H17 2.953 -2.562 -0.881
H18 4.237 -1.737 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.34501.84322.42322.42322.75902.90972.90974.16714.47084.47085.30945.39045.39046.66496.90016.90017.4835
H21.34502.41432.64682.64683.74824.02104.02104.95125.08495.08496.27246.44136.44137.50187.63527.63528.4103
C31.84322.41431.08911.08911.52482.15012.15012.53862.76272.76273.91084.19494.19495.08935.24925.24926.0158
H42.42322.64681.08911.76912.16253.05842.50072.79402.57123.11594.21924.40364.74195.23615.16695.46026.2094
H52.42322.64681.08911.76912.16252.50073.05842.79403.11592.57124.21924.74194.40365.23615.46025.16696.2094
C62.75903.74821.52482.16252.16251.09341.09341.52992.15672.15672.55502.77672.77673.92044.24354.24354.7257
H72.90974.02102.15013.05842.50071.09341.75272.15773.05952.50832.78623.10122.55994.21024.76964.43414.8869
H82.90974.02102.15012.50073.05841.09341.75272.15772.50833.05952.78622.55993.10124.21024.43414.76964.8869
C94.16714.95122.53862.79402.79401.52992.15772.15771.09491.09491.52922.15262.15262.55082.81802.81803.4993
H104.47085.08492.76272.57123.11592.15673.05952.50831.09491.75102.15352.50323.05422.77342.59573.13423.7752
H114.47085.08492.76273.11592.57122.15672.50833.05951.09491.75102.15353.05422.50322.77343.13422.59573.7752
C125.30946.27243.91084.21924.21922.55502.78622.78621.52922.15352.15351.09391.09391.52722.17472.17472.1765
H135.39046.44134.19494.40364.74192.77673.10122.55992.15262.50323.05421.09391.74862.15502.51923.07042.4957
H145.39046.44134.19494.74194.40362.77672.55993.10122.15263.05422.50321.09391.74862.15503.07042.51922.4957
C156.66497.50185.08935.23615.23613.92044.21024.21022.55082.77342.77341.52722.15502.15501.09191.09191.0907
H166.90017.63525.24925.16695.46024.24354.76964.43412.81802.59573.13422.17472.51923.07041.09191.76191.7622
H176.90017.63525.24925.46025.16694.24354.43414.76962.81803.13422.59572.17473.07042.51921.09191.76191.7622
H187.48358.41036.01586.20946.20944.72574.88694.88693.49933.77523.77522.17652.49572.49571.09071.76221.7622

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 108.715 S1 C3 H5 108.715
S1 C3 C6 109.645 H2 S1 C3 97.213
C3 C6 H7 109.305 C3 C6 H8 109.305
C3 C6 C9 112.410 H4 C3 H5 108.628
H4 C3 C6 110.545 H5 C3 C6 110.545
C6 C9 H10 109.382 C6 C9 H11 109.382
C6 C9 C12 113.277 H7 C6 H8 106.545
H7 C6 C9 109.552 H8 C6 C9 109.552
C9 C12 H13 109.171 C9 C12 H14 109.171
C9 C12 C15 113.144 H10 C9 H11 106.188
H10 C9 C12 109.183 H11 C9 C12 109.183
C12 C15 H16 111.169 C12 C15 H17 111.169
C12 C15 H18 111.387 H13 C12 H14 106.122
H13 C12 C15 109.495 H14 C12 C15 109.495
H16 C15 H17 107.567 H16 C15 H18 107.683
H17 C15 H18 107.683
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability