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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: B97D3/aug-cc-pVTZ

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at B97D3/aug-cc-pVTZ
 hartrees
Energy at 0K-595.939515
Energy at 298.15K-595.952155
HF Energy-595.939515
Nuclear repulsion energy286.395710
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at B97D3/aug-cc-pVTZ
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3043 2996 44.39      
2 A' 2998 2952 43.11      
3 A' 2973 2928 63.78      
4 A' 2971 2926 25.08      
5 A' 2962 2917 18.69      
6 A' 2951 2906 6.08      
7 A' 2632 2591 6.61      
8 A' 1483 1460 7.04      
9 A' 1473 1451 0.18      
10 A' 1462 1439 1.14      
11 A' 1457 1434 1.28      
12 A' 1453 1431 0.51      
13 A' 1389 1368 1.46      
14 A' 1369 1348 0.31      
15 A' 1348 1327 7.70      
16 A' 1285 1266 4.66      
17 A' 1220 1202 21.71      
18 A' 1114 1097 2.42      
19 A' 1045 1029 0.27      
20 A' 1036 1020 1.13      
21 A' 1002 987 0.17      
22 A' 890 876 0.47      
23 A' 840 827 0.47      
24 A' 710 699 5.47      
25 A' 433 426 1.33      
26 A' 343 337 0.22      
27 A' 243 239 0.99      
28 A' 114 112 0.95      
29 A" 3050 3003 31.41      
30 A" 3037 2991 62.50      
31 A" 3011 2965 34.23      
32 A" 2994 2948 5.54      
33 A" 2973 2928 0.80      
34 A" 1473 1451 6.51      
35 A" 1313 1293 0.31      
36 A" 1308 1288 0.46      
37 A" 1263 1243 0.12      
38 A" 1198 1180 0.24      
39 A" 1060 1044 1.66      
40 A" 950 935 0.10      
41 A" 830 817 1.38      
42 A" 747 735 0.10      
43 A" 720 709 3.91      
44 A" 243 239 0.00      
45 A" 159 156 7.71      
46 A" 137 134 2.52      
47 A" 83 81 2.18      
48 A" 55 54 2.56      

Unscaled Zero Point Vibrational Energy (zpe) 34419.8 cm-1
Scaled (by 0.9847) Zero Point Vibrational Energy (zpe) 33893.2 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at B97D3/aug-cc-pVTZ
ABC
0.47632 0.02651 0.02571

See section I.F.4 to change rotational constant units
Geometric Data calculated at B97D3/aug-cc-pVTZ

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -2.429 1.668 0.000
H2 -3.667 1.134 0.000
C3 -1.500 0.073 0.000
H4 -1.781 -0.499 0.889
H5 -1.781 -0.499 -0.889
C6 0.000 0.358 0.000
H7 0.256 0.962 -0.880
H8 0.256 0.962 0.880
C9 0.833 -0.927 0.000
H10 0.571 -1.533 0.879
H11 0.571 -1.533 -0.879
C12 2.342 -0.666 0.000
H13 2.603 -0.060 0.878
H14 2.603 -0.060 -0.878
C15 3.171 -1.953 0.000
H16 2.951 -2.562 0.884
H17 2.951 -2.562 -0.884
H18 4.244 -1.738 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.34841.84522.42952.42952.75932.91122.91124.16824.47334.47335.31125.39145.39146.66766.90026.90027.4916
H21.34842.41322.64862.64863.74854.02374.02374.95035.08395.08396.27356.44256.44257.50237.63207.63208.4167
C31.84522.41321.09361.09361.52642.15512.15512.53862.76372.76373.91264.19724.19725.09085.24765.24766.0228
H42.42952.64861.09361.77702.16673.06722.50632.79422.56893.11804.22124.40534.74625.23655.16225.45826.2151
H52.42952.64861.09361.77702.16672.50633.06722.79423.11802.56894.22124.74624.40535.23655.45825.16226.2151
C62.75933.74851.52642.16672.16671.09741.09741.53152.16132.16132.55642.77822.77823.92314.24454.24454.7335
H72.91124.02372.15513.06722.50631.09741.75912.16273.06842.51472.78943.10512.56004.21524.77474.43704.8964
H82.91124.02372.15512.50633.06721.09741.75912.16272.51473.06842.78942.56003.10514.21524.43704.77474.8964
C94.16824.95032.53862.79422.79421.53152.16272.16271.09891.09891.53132.15682.15682.55232.81772.81773.5059
H104.47335.08392.76372.56893.11802.16133.06842.51471.09891.75742.15892.50923.06292.77622.59343.13593.7826
H114.47335.08392.76373.11802.56892.16132.51473.06841.09891.75742.15893.06292.50922.77623.13592.59343.7826
C125.31126.27353.91264.22124.22122.55642.78942.78941.53132.15892.15891.09811.09811.52992.17862.17862.1830
H135.39146.44254.19724.40534.74622.77823.10512.56002.15682.50923.06291.09811.75552.16222.52623.08002.5062
H145.39146.44254.19724.74624.40532.77822.56003.10512.15683.06292.50921.09811.75552.16223.08002.52622.5062
C156.66767.50235.09085.23655.23653.92314.21524.21522.55232.77622.77621.52992.16222.16221.09621.09621.0949
H166.90027.63205.24765.16225.45824.24454.77474.43702.81772.59343.13592.17862.52623.08001.09621.76861.7701
H176.90027.63205.24765.45825.16224.24454.43704.77472.81773.13592.59342.17863.08002.52621.09621.76861.7701
H187.49168.41676.02286.21516.21514.73354.89644.89643.50593.78263.78262.18302.50622.50621.09491.77011.7701

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 108.823 S1 C3 H5 108.823
S1 C3 C6 109.490 H2 S1 C3 96.936
C3 C6 H7 109.351 C3 C6 H8 109.351
C3 C6 C9 112.237 H4 C3 H5 108.676
H4 C3 C6 110.494 H5 C3 C6 110.494
C6 C9 H10 109.401 C6 C9 H11 109.401
C6 C9 C12 113.168 H7 C6 H8 106.540
H7 C6 C9 109.599 H8 C6 C9 109.599
C9 C12 H13 109.117 C9 C12 H14 109.117
C9 C12 C15 112.974 H10 C9 H11 106.178
H10 C9 C12 109.227 H11 C9 C12 109.227
C12 C15 H16 111.038 C12 C15 H17 111.038
C12 C15 H18 111.469 H13 C12 H14 106.137
H13 C12 C15 109.632 H14 C12 C15 109.632
H16 C15 H17 107.560 H16 C15 H18 107.781
H17 C15 H18 107.781
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at B97D3/aug-cc-pVTZ Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S -0.304      
2 H -0.008      
3 C -0.261      
4 H 0.129      
5 H 0.129      
6 C -0.069      
7 H 0.140      
8 H 0.140      
9 C 0.045      
10 H 0.124      
11 H 0.124      
12 C -0.109      
13 H 0.083      
14 H 0.083      
15 C -0.615      
16 H 0.139      
17 H 0.139      
18 H 0.090      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  0.543 -1.640 0.000 1.728
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -46.554 3.739 0.000
y 3.739 -52.059 0.000
z 0.000 0.000 -48.782
Traceless
 xyz
x 3.866 3.739 0.000
y 3.739 -4.391 0.000
z 0.000 0.000 0.524
Polar
3z2-r21.049
x2-y25.505
xy3.739
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 15.802 -2.378 0.000
y -2.378 13.470 0.000
z 0.000 0.000 11.288


<r2> (average value of r2) Å2
<r2> 413.764
(<r2>)1/2 20.341