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All results from a given calculation for C5H4N4 (purine)

using model chemistry: TPSSh/6-31G(2df,p)

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at TPSSh/6-31G(2df,p)
 hartrees
Energy at 0K-412.002006
Energy at 298.15K-412.009834
HF Energy-412.002006
Nuclear repulsion energy412.229042
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at TPSSh/6-31G(2df,p)
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3644 3517 75.24      
2 A' 3244 3131 1.35      
3 A' 3178 3066 19.48      
4 A' 3165 3054 18.03      
5 A' 1640 1583 60.46      
6 A' 1608 1551 72.69      
7 A' 1517 1464 23.38      
8 A' 1478 1426 3.23      
9 A' 1423 1373 56.26      
10 A' 1411 1361 14.27      
11 A' 1362 1314 53.15      
12 A' 1315 1269 26.81      
13 A' 1297 1252 9.64      
14 A' 1277 1232 42.39      
15 A' 1196 1154 6.34      
16 A' 1127 1087 5.34      
17 A' 1080 1043 12.38      
18 A' 935 902 1.38      
19 A' 901 869 13.05      
20 A' 798 770 14.35      
21 A' 650 627 0.54      
22 A' 561 541 4.16      
23 A' 438 423 11.75      
24 A" 999 964 0.40      
25 A" 945 912 6.96      
26 A" 877 846 5.42      
27 A" 817 789 8.51      
28 A" 662 639 4.03      
29 A" 622 600 25.67      
30 A" 533 514 86.80      
31 A" 414 399 2.66      
32 A" 242 234 0.35      
33 A" 232 224 4.06      

Unscaled Zero Point Vibrational Energy (zpe) 20793.0 cm-1
Scaled (by 0.965) Zero Point Vibrational Energy (zpe) 20065.3 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at TPSSh/6-31G(2df,p)
ABC
0.13755 0.05856 0.04107

See section I.F.4 to change rotational constant units
Geometric Data calculated at TPSSh/6-31G(2df,p)

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.833 -1.253 0.000
C2 -2.120 0.067 0.000
N3 -1.272 1.098 0.000
C4 0.000 0.697 0.000
C5 0.452 -0.635 0.000
C6 -0.546 -1.610 0.000
N7 1.840 -0.681 0.000
C8 2.204 0.578 0.000
N9 1.143 1.461 0.000
H10 -3.178 0.315 0.000
H11 -0.316 -2.673 0.000
H12 3.227 0.930 0.000
H13 1.186 2.468 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.35032.41702.67632.36661.33523.71724.43294.02692.06552.07825.51074.7914
C21.35031.33562.21192.66562.29934.03004.35453.54791.08683.28025.41644.0862
N32.41701.33561.33352.44412.80353.58453.51502.44142.06113.89024.50212.8139
C42.67632.21191.33351.40672.37102.29892.20761.37403.20123.38473.23552.1310
C52.36662.66562.44411.40671.39511.38922.13132.20653.75192.17733.18623.1884
C61.33522.29932.80352.37101.39512.56083.51443.50433.26041.08764.54854.4303
N73.71724.03003.58452.29891.38922.56081.31012.25225.11602.93482.12563.2156
C84.43294.35453.51502.20762.13133.51441.31011.38105.38904.11261.08172.1469
N94.02693.54792.44141.37402.20653.50432.25221.38104.47014.38282.15111.0080
H102.06551.08682.06113.20123.75193.26045.11605.38904.47014.13756.43484.8667
H112.07823.28023.89023.38472.17731.08762.93484.11264.38284.13755.05245.3552
H125.51075.41644.50213.23553.18624.54852.12561.08172.15116.43485.05242.5554
H134.79144.08622.81392.13103.18844.43033.21562.14691.00804.86675.35522.5554

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 128.296 N1 C2 H10 115.467
N1 C6 C5 120.157 N1 C6 H11 117.767
C2 N1 C6 117.786 C2 N3 C4 111.933
N3 C2 H10 116.237 N3 C4 C5 126.217
N3 C4 N9 128.763 C4 C5 C6 115.610
C4 C5 N7 110.618 C4 N9 C8 106.510
C4 N9 H13 126.232 C5 C4 N9 105.020
C5 C6 H11 122.075 C5 N7 C8 104.253
C6 C5 N7 133.772 N7 C8 N9 113.598
N7 C8 H12 125.153 C8 N9 H13 127.258
N9 C8 H12 121.249
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability