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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: HF/3-21G

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at HF/3-21G
 hartrees
Energy at 0K-590.805224
Energy at 298.15K-590.818403
Nuclear repulsion energy284.955332
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at HF/3-21G
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3263 2955 24.77      
2 A' 3254 2947 43.06      
3 A' 3218 2914 19.77      
4 A' 3199 2897 23.12      
5 A' 3195 2893 33.98      
6 A' 3189 2888 5.62      
7 A' 2619 2371 38.11      
8 A' 1676 1518 8.97      
9 A' 1667 1510 4.43      
10 A' 1657 1500 0.68      
11 A' 1654 1498 0.75      
12 A' 1640 1485 5.73      
13 A' 1575 1427 4.52      
14 A' 1520 1376 0.12      
15 A' 1511 1368 10.09      
16 A' 1454 1317 20.70      
17 A' 1390 1259 23.70      
18 A' 1229 1113 10.63      
19 A' 1109 1004 1.62      
20 A' 1095 992 0.27      
21 A' 1053 954 0.29      
22 A' 956 865 1.57      
23 A' 905 820 4.38      
24 A' 737 667 13.13      
25 A' 472 427 3.48      
26 A' 368 333 0.45      
27 A' 263 238 2.53      
28 A' 123 111 1.57      
29 A" 3327 3012 16.51      
30 A" 3265 2957 84.26      
31 A" 3254 2947 8.52      
32 A" 3230 2925 2.12      
33 A" 3212 2909 0.87      
34 A" 1673 1515 8.38      
35 A" 1476 1337 0.77      
36 A" 1474 1335 0.15      
37 A" 1426 1291 0.17      
38 A" 1347 1220 0.01      
39 A" 1202 1088 0.80      
40 A" 1066 965 0.02      
41 A" 924 837 1.83      
42 A" 831 752 0.10      
43 A" 798 723 6.64      
44 A" 259 235 0.04      
45 A" 183 166 24.61      
46 A" 152 138 3.81      
47 A" 110 100 6.03      
48 A" 68 61 2.13      

Unscaled Zero Point Vibrational Energy (zpe) 37632.0 cm-1
Scaled (by 0.9056) Zero Point Vibrational Energy (zpe) 34079.6 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at HF/3-21G
ABC
0.47127 0.02619 0.02539

See section I.F.4 to change rotational constant units
Geometric Data calculated at HF/3-21G

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -2.500 1.614 0.000
H2 -3.738 1.066 0.000
C3 -1.490 0.004 0.000
H4 -1.757 -0.553 0.884
H5 -1.757 -0.553 -0.884
C6 0.000 0.356 0.000
H7 0.229 0.952 -0.876
H8 0.229 0.952 0.876
C9 0.869 -0.918 0.000
H10 0.633 -1.516 0.875
H11 0.633 -1.516 -0.875
C12 2.375 -0.593 0.000
H13 2.611 0.006 0.874
H14 2.611 0.006 -0.874
C15 3.239 -1.868 0.000
H16 3.031 -2.470 0.879
H17 3.031 -2.470 -0.879
H18 4.295 -1.622 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.35341.90032.45552.45552.79922.94192.94194.21474.51434.51435.35145.42965.42966.71296.93186.93187.5263
H21.35342.48522.70612.70613.80444.06384.06385.01555.15075.15076.33346.49596.49597.56807.68707.68708.4700
C31.90032.48521.07871.07871.53112.14982.14982.53322.75412.75413.91104.19384.19385.08625.22875.22876.0093
H42.45552.70611.07871.76872.16683.05092.49202.79512.57673.12034.22584.40414.74225.24135.15805.45106.2089
H52.45552.70611.07871.76872.16682.49203.05092.79513.12032.57674.22584.74224.40415.24135.45105.15806.2089
C62.79923.80441.53112.16682.16681.08411.08411.54182.16092.16092.55722.77602.77603.92874.23614.23614.7282
H72.94194.06382.14983.05092.49201.08411.75162.16193.05312.50092.78533.10382.56344.21664.75824.42304.8911
H82.94194.06382.14982.49203.05091.08411.75162.16192.50093.05312.78532.56343.10384.21664.42304.75824.8911
C94.21475.01552.53322.79512.79511.54182.16192.16191.08621.08621.54062.15712.15712.55312.80282.80283.4972
H104.51435.15072.75412.57673.12032.16093.05312.50091.08621.75092.15742.49623.04842.77162.58143.12103.7666
H114.51435.15072.75413.12032.57672.16092.50093.05311.08621.75092.15743.04842.49622.77163.12102.58143.7666
C125.35146.33343.91104.22584.22582.55722.78532.78531.54062.15742.15741.08551.08551.54062.17412.17412.1784
H135.42966.49594.19384.40414.74222.77603.10382.56342.15712.49623.04841.08551.74862.16102.51093.06232.4996
H145.42966.49594.19384.74224.40412.77602.56343.10382.15713.04842.49621.08551.74862.16103.06232.51092.4996
C156.71297.56805.08625.24135.24133.92874.21664.21662.55312.77162.77161.54062.16102.16101.08481.08481.0843
H166.93187.68705.22875.15805.45104.23614.75824.42302.80282.58143.12102.17412.51093.06231.08481.75741.7568
H176.93187.68705.22875.45105.15804.23614.42304.75822.80283.12102.58142.17413.06232.51091.08481.75741.7568
H187.52638.47006.00936.20896.20894.72824.89114.89113.49723.76663.76662.17842.49962.49961.08431.75681.7568

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 107.816 S1 C3 H5 107.816
S1 C3 C6 108.844 H2 S1 C3 98.197
C3 C6 H7 109.383 C3 C6 H8 109.383
C3 C6 C9 111.047 H4 C3 H5 110.133
H4 C3 C6 111.055 H5 C3 C6 111.055
C6 C9 H10 109.396 C6 C9 H11 109.396
C6 C9 C12 112.118 H7 C6 H8 107.768
H7 C6 C9 109.598 H8 C6 C9 109.598
C9 C12 H13 109.228 C9 C12 H14 109.228
C9 C12 C15 111.910 H10 C9 H11 107.402
H10 C9 C12 109.207 H11 C9 C12 109.207
C12 C15 H16 110.609 C12 C15 H17 110.609
C12 C15 H18 110.984 H13 C12 H14 107.301
H13 C12 C15 109.531 H14 C12 C15 109.531
H16 C15 H17 108.187 H16 C15 H18 108.175
H17 C15 H18 108.175
Electronic energy levels

Electronic state

Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at HF/3-21G Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S 0.015 -0.397   -0.420
2 H 0.064 0.214   0.232
3 C -0.646 -0.094   -0.253
4 H 0.248 0.066   0.143
5 H 0.248 0.066   0.143
6 C -0.417 0.196   0.060
7 H 0.230 0.007   0.068
8 H 0.230 0.007   0.068
9 C -0.395 -0.209   -0.257
10 H 0.206 0.039   0.071
11 H 0.206 0.039   0.071
12 C -0.423 0.252   0.201
13 H 0.209 -0.059   -0.026
14 H 0.209 -0.059   -0.026
15 C -0.584 -0.142   -0.299
16 H 0.199 0.025   0.074
17 H 0.199 0.025   0.074
18 H 0.203 0.025   0.073


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  0.466 -2.221 0.000 2.269
CHELPG 0.268 -1.828 0.000 1.848
AIM        
ESP 0.432 -2.242 0.000 2.283


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -46.193 4.708 0.000
y 4.708 -53.936 0.000
z 0.000 0.000 -49.390
Traceless
 xyz
x 5.470 4.708 0.000
y 4.708 -6.144 0.000
z 0.000 0.000 0.674
Polar
3z2-r21.349
x2-y27.743
xy4.708
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 12.026 -1.847 0.000
y -1.847 9.678 0.000
z 0.000 0.000 7.434


<r2> (average value of r2) Å2
<r2> 418.537
(<r2>)1/2 20.458