return to home page Computational Chemistry Comparison and Benchmark DataBase Release 22 (May 2022) Standard Reference Database 101 National Institute of Standards and Technology
You are here: Calculated > Energy > Optimized > Energy

All results from a given calculation for C5H4N4 (purine)

using model chemistry: HF/3-21G

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at HF/3-21G
 hartrees
Energy at 0K-407.152017
Energy at 298.15K-407.160605
HF Energy-407.152017
Nuclear repulsion energy414.201270
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at HF/3-21G
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3850 3487 147.44      
2 A' 3468 3140 1.33      
3 A' 3426 3103 18.63      
4 A' 3405 3083 8.43      
5 A' 1772 1605 95.58      
6 A' 1722 1560 76.16      
7 A' 1641 1486 40.89      
8 A' 1592 1442 15.51      
9 A' 1533 1389 27.54      
10 A' 1522 1378 34.29      
11 A' 1469 1330 53.18      
12 A' 1395 1263 14.76      
13 A' 1392 1261 78.87      
14 A' 1286 1164 2.77      
15 A' 1227 1112 57.36      
16 A' 1195 1082 1.76      
17 A' 1136 1028 33.86      
18 A' 1022 926 0.13      
19 A' 976 884 17.35      
20 A' 860 779 18.09      
21 A' 726 657 0.60      
22 A' 621 563 3.41      
23 A' 475 430 15.07      
24 A" 1179 1068 1.33      
25 A" 1118 1012 5.80      
26 A" 1064 963 0.01      
27 A" 997 903 51.58      
28 A" 766 694 188.51      
29 A" 737 667 5.00      
30 A" 692 627 55.07      
31 A" 521 472 3.79      
32 A" 304 276 2.50      
33 A" 275 249 5.52      

Unscaled Zero Point Vibrational Energy (zpe) 22682.1 cm-1
Scaled (by 0.9056) Zero Point Vibrational Energy (zpe) 20540.9 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at HF/3-21G
ABC
0.14107 0.05843 0.04132

See section I.F.4 to change rotational constant units
Geometric Data calculated at HF/3-21G

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.804 -1.250 0.000
C2 -2.118 0.059 0.000
N3 -1.273 1.069 0.000
C4 0.000 0.694 0.000
C5 0.447 -0.618 0.000
C6 -0.532 -1.594 0.000
N7 1.836 -0.668 0.000
C8 2.190 0.575 0.000
N9 1.123 1.460 0.000
H10 -3.156 0.292 0.000
H11 -0.296 -2.634 0.000
H12 3.198 0.906 0.000
H13 1.156 2.455 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.34622.37922.65202.33831.31823.68694.39153.98962.05102.04775.44714.7427
C21.34621.31712.21112.65272.29114.02074.33883.53141.06423.25235.38314.0574
N32.37921.31711.32702.40872.76433.56133.49762.42792.03763.83044.47372.7965
C42.65202.21111.32701.38522.34872.28582.19301.36013.18193.34123.20502.1072
C52.33832.65272.40871.38521.38251.39042.11222.18513.71632.14923.14483.1537
C61.31822.29112.76432.34871.38252.54293.48063.47403.23211.06694.49014.3871
N73.68694.02073.56132.28581.39042.54291.29232.24405.08422.90062.08093.1963
C84.39154.33883.49762.19302.11223.48061.29231.38565.35384.05971.06092.1455
N93.98963.53142.42791.36012.18513.47402.24401.38564.43644.33362.14720.9958
H102.05101.06422.03763.18193.71633.23215.08425.35384.43644.09276.38394.8246
H112.04773.25233.83043.34122.14921.06692.90064.05974.33364.09274.97385.2928
H125.44715.38314.47373.20503.14484.49012.08091.06092.14726.38394.97382.5633
H134.74274.05742.79652.10723.15374.38713.19632.14550.99584.82465.29282.5633

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 126.591 N1 C2 H10 116.132
N1 C6 C5 119.933 N1 C6 H11 117.926
C2 N1 C6 118.611 C2 N3 C4 113.491
N3 C2 H10 117.277 N3 C4 C5 125.255
N3 C4 N9 129.257 C4 C5 C6 116.119
C4 C5 N7 110.880 C4 N9 C8 106.013
C4 N9 H13 126.177 C5 C4 N9 105.488
C5 C6 H11 122.142 C5 N7 C8 103.813
C6 C5 N7 133.001 N7 C8 N9 113.806
N7 C8 H12 124.028 C8 N9 H13 127.811
N9 C8 H12 122.166
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at HF/3-21G Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 N -0.685      
2 C 0.325      
3 N -0.729      
4 C 0.809      
5 C 0.053      
6 C 0.214      
7 N -0.660      
8 C 0.403      
9 N -0.972      
10 H 0.273      
11 H 0.289      
12 H 0.287      
13 H 0.392      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  2.109 2.961 0.000 3.635
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -50.497 6.443 0.000
y 6.443 -48.442 0.000
z 0.000 0.000 -53.107
Traceless
 xyz
x 0.277 6.443 0.000
y 6.443 3.360 0.000
z 0.000 0.000 -3.638
Polar
3z2-r2-7.275
x2-y2-2.055
xy6.443
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 12.426 1.340 0.000
y 1.340 9.928 0.000
z 0.000 0.000 2.984


<r2> (average value of r2) Å2
<r2> 253.424
(<r2>)1/2 15.919