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All results from a given calculation for C5H4N4 (purine)

using model chemistry: CID/3-21G

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at CID/3-21G
 hartrees
Energy at 0K-407.846597
Energy at 298.15K-407.854881
HF Energy-407.150202
Nuclear repulsion energy410.834705
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at CID/3-21G
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3741 3485 128.25      
2 A' 3383 3151 1.08      
3 A' 3337 3109 17.20      
4 A' 3314 3087 8.40      
5 A' 1693 1578 73.06      
6 A' 1647 1534 47.52      
7 A' 1557 1450 38.21      
8 A' 1534 1429 7.31      
9 A' 1478 1377 25.35      
10 A' 1466 1366 26.39      
11 A' 1415 1318 36.94      
12 A' 1345 1253 49.00      
13 A' 1339 1247 52.30      
14 A' 1239 1154 3.08      
15 A' 1178 1097 52.60      
16 A' 1148 1069 9.09      
17 A' 1105 1030 21.86      
18 A' 984 917 0.08      
19 A' 943 878 15.51      
20 A' 828 772 13.86      
21 A' 698 650 0.59      
22 A' 599 558 2.93      
23 A' 456 425 14.73      
24 A" 1086 1012 0.85      
25 A" 1034 963 12.86      
26 A" 969 903 1.66      
27 A" 909 847 29.26      
28 A" 711 662 73.38      
29 A" 682 635 79.36      
30 A" 661 616 70.45      
31 A" 482 449 2.69      
32 A" 282 263 1.95      
33 A" 253 236 4.78      

Unscaled Zero Point Vibrational Energy (zpe) 21746.9 cm-1
Scaled (by 0.9316) Zero Point Vibrational Energy (zpe) 20259.4 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at CID/3-21G
ABC
0.13819 0.05767 0.04069

See section I.F.4 to change rotational constant units
Geometric Data calculated at CID/3-21G

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.817 -1.268 0.000
C2 -2.131 0.056 0.000
N3 -1.285 1.082 0.000
C4 0.000 0.701 0.000
C5 0.453 -0.623 0.000
C6 -0.531 -1.609 0.000
N7 1.851 -0.677 0.000
C8 2.201 0.586 0.000
N9 1.128 1.477 0.000
H10 -3.178 0.289 0.000
H11 -0.289 -2.657 0.000
H12 3.216 0.923 0.000
H13 1.158 2.480 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.36152.40992.67942.36001.32963.71474.42504.02572.06872.06465.48854.7854
C21.36151.33022.22682.67262.30954.04914.36503.55551.07263.27985.41684.0860
N32.40991.33021.33982.43482.79483.59513.52112.44472.05333.86954.50302.8143
C42.67942.22681.33981.39972.37082.30762.20441.36893.20513.37073.22322.1227
C52.36002.67262.43481.39971.39371.39832.12512.20543.74462.16533.16523.1822
C61.32962.30952.79482.37081.39372.55803.50503.50383.25731.07554.52224.4247
N73.71474.04913.59512.30761.39832.55801.31052.27185.12112.91522.10293.2324
C84.42504.36503.52112.20442.12513.50501.31051.39505.38804.08861.06882.1629
N94.02573.55552.44471.36892.20543.50382.27181.39504.46744.36992.15981.0040
H102.06871.07262.05333.20513.74463.25735.12115.38804.46744.12656.42544.8587
H112.06463.27983.86953.37072.16531.07552.91524.08864.36994.12655.00965.3372
H125.48855.41684.50303.22323.16524.52222.10291.06882.15986.42545.00962.5808
H134.78544.08602.81432.12273.18224.42473.23242.16291.00404.85875.33722.5808

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 127.092 N1 C2 H10 115.893
N1 C6 C5 120.103 N1 C6 H11 117.884
C2 N1 C6 118.225 C2 N3 C4 113.023
N3 C2 H10 117.016 N3 C4 C5 125.418
N3 C4 N9 128.978 C4 C5 C6 116.140
C4 C5 N7 111.119 C4 N9 C8 105.793
C4 N9 H13 126.210 C5 C4 N9 105.604
C5 C6 H11 122.014 C5 N7 C8 103.302
C6 C5 N7 132.741 N7 C8 N9 114.182
N7 C8 H12 123.898 C8 N9 H13 127.996
N9 C8 H12 121.920
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability