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All results from a given calculation for C5H4N4 (purine)

using model chemistry: QCISD/3-21G

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at QCISD/3-21G
 hartrees
Energy at 0K-408.040139
Energy at 298.15K-408.048043
HF Energy-407.142070
Nuclear repulsion energy405.958974
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at QCISD/3-21G
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3593 3482 99.13      
2 A' 3254 3154 1.74      
3 A' 3201 3103 18.53      
4 A' 3179 3081 10.29      
5 A' 1591 1542 63.83      
6 A' 1547 1499 31.03      
7 A' 1469 1423 41.53      
8 A' 1460 1415 2.00      
9 A' 1406 1363 19.61      
10 A' 1392 1349 19.03      
11 A' 1338 1297 14.18      
12 A' 1277 1237 31.67      
13 A' 1255 1216 78.87      
14 A' 1172 1135 2.89      
15 A' 1091 1058 51.41      
16 A' 1074 1041 12.56      
17 A' 1042 1010 12.43      
18 A' 931 902 1.13      
19 A' 892 864 14.69      
20 A' 780 756 10.68      
21 A' 663 643 0.56      
22 A' 569 551 2.40      
23 A' 431 417 13.74      
24 A" 1009 978 0.55      
25 A" 960 930 15.25      
26 A" 887 859 3.67      
27 A" 842 816 20.58      
28 A" 666 645 30.60      
29 A" 627 608 0.36      
30 A" 615 596 171.05      
31 A" 443 430 2.42      
32 A" 261 253 1.37      
33 A" 235 227 4.46      

Unscaled Zero Point Vibrational Energy (zpe) 20573.4 cm-1
Scaled (by 0.9692) Zero Point Vibrational Energy (zpe) 19939.7 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at QCISD/3-21G
ABC
0.13449 0.05645 0.03976

See section I.F.4 to change rotational constant units
Geometric Data calculated at QCISD/3-21G

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.838 -1.289 0.000
C2 -2.156 0.053 0.000
N3 -1.301 1.097 0.000
C4 0.000 0.711 0.000
C5 0.460 -0.630 0.000
C6 -0.535 -1.630 0.000
N7 1.873 -0.686 0.000
C8 2.226 0.597 0.000
N9 1.138 1.499 0.000
H10 -3.214 0.287 0.000
H11 -0.286 -2.688 0.000
H12 3.249 0.941 0.000
H13 1.164 2.512 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.37992.44572.71592.39061.34683.75934.47984.07762.09312.08945.55424.8434
C21.37991.34892.25352.70402.33694.09594.41493.59671.08433.31865.47724.1309
N32.44571.34891.35682.46682.83213.64013.56162.47152.07793.91874.55262.8421
C42.71592.25351.35681.41792.40062.33632.22861.38423.24213.41073.25742.1446
C52.39062.70402.46681.41791.41011.41362.15012.23443.78772.18873.20103.2200
C61.34682.33692.83212.40061.41012.58593.54653.54743.29491.08734.57444.4763
N73.75934.09593.64012.33631.41362.58591.33072.30495.17962.94422.13083.2752
C84.47984.41493.56162.22862.15013.54651.33071.41285.44894.13511.07972.1891
N94.07763.59672.47151.38422.23443.54742.30491.41284.51784.42222.18371.0134
H102.09311.08432.07793.24213.78773.29495.17965.44894.51784.17506.49664.9113
H112.08943.31863.91873.41072.18871.08732.94424.13514.42224.17505.06605.3981
H125.55425.47724.55263.25743.20104.57442.13081.07972.18376.49665.06602.6105
H134.84344.13092.84212.14463.22004.47633.27522.18911.01344.91135.39812.6105

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 127.345 N1 C2 H10 115.774
N1 C6 C5 120.237 N1 C6 H11 117.877
C2 N1 C6 117.965 C2 N3 C4 112.793
N3 C2 H10 116.881 N3 C4 C5 125.489
N3 C4 N9 128.758 C4 C5 C6 116.171
C4 C5 N7 111.198 C4 N9 C8 105.644
C4 N9 H13 126.188 C5 C4 N9 105.753
C5 C6 H11 121.886 C5 N7 C8 103.122
C6 C5 N7 132.632 N7 C8 N9 114.283
N7 C8 H12 123.932 C8 N9 H13 128.168
N9 C8 H12 121.784
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability