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All results from a given calculation for C5H4N4 (purine)

using model chemistry: B3PW91/6-311G**

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at B3PW91/6-311G**
 hartrees
Energy at 0K-411.884910
Energy at 298.15K-411.892830
HF Energy-411.884910
Nuclear repulsion energy413.484418
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at B3PW91/6-311G**
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3669 3534 93.11      
2 A' 3242 3123 0.48      
3 A' 3182 3064 14.42      
4 A' 3170 3053 14.58      
5 A' 1668 1606 64.35      
6 A' 1630 1569 81.43      
7 A' 1534 1478 26.93      
8 A' 1492 1437 2.51      
9 A' 1437 1384 56.47      
10 A' 1422 1370 30.34      
11 A' 1373 1322 60.19      
12 A' 1319 1271 14.96      
13 A' 1309 1260 15.34      
14 A' 1285 1237 34.72      
15 A' 1208 1164 7.36      
16 A' 1141 1099 6.85      
17 A' 1088 1047 16.10      
18 A' 949 914 1.44      
19 A' 915 881 12.58      
20 A' 811 782 13.93      
21 A' 662 637 0.38      
22 A' 570 549 3.75      
23 A' 446 430 12.90      
24 A" 997 960 0.32      
25 A" 945 910 11.55      
26 A" 886 853 6.09      
27 A" 821 791 11.35      
28 A" 668 644 5.80      
29 A" 626 603 28.12      
30 A" 555 535 94.37      
31 A" 419 403 2.98      
32 A" 246 237 0.57      
33 A" 232 224 5.02      

Unscaled Zero Point Vibrational Energy (zpe) 20958.2 cm-1
Scaled (by 0.9631) Zero Point Vibrational Energy (zpe) 20184.8 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at B3PW91/6-311G**
ABC
0.13869 0.05883 0.04131

See section I.F.4 to change rotational constant units
Geometric Data calculated at B3PW91/6-311G**

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.812 -1.251 0.000
C2 -2.099 0.068 0.000
N3 -1.267 1.099 0.000
C4 0.000 0.702 0.000
C5 0.451 -0.625 0.000
C6 -0.539 -1.605 0.000
N7 1.829 -0.689 0.000
C8 2.179 0.567 0.000
N9 1.127 1.463 0.000
H10 -3.155 0.308 0.000
H11 -0.313 -2.667 0.000
H12 3.206 0.898 0.000
H13 1.170 2.468 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.34952.41182.66402.34801.32203.68484.38564.00002.05732.06305.45914.7670
C21.34951.32402.19222.64172.28774.00014.30663.51391.08363.26695.36944.0550
N32.41181.32401.32802.43342.80053.57553.48732.42172.04693.88534.47832.7956
C42.66402.19221.32801.40102.36942.29792.18331.35953.17983.38393.21242.1186
C52.34802.64172.43341.40101.39311.38022.09912.19393.72462.18093.14823.1755
C61.32202.28772.80052.36941.39312.53933.47903.49093.24141.08594.50454.4175
N73.68484.00013.57552.29791.38022.53931.30292.26295.08332.91632.10053.2252
C84.38564.30663.48732.18332.09913.47901.30291.38205.34074.08271.07932.1532
N94.00003.51392.42171.35952.19393.49092.26291.38204.43524.37372.15491.0068
H102.05731.08362.04693.17983.72463.24145.08335.34074.43524.11496.38904.8347
H112.06303.26693.88533.38392.18091.08592.91634.08274.37374.11495.00945.3456
H125.45915.36944.47833.21243.14824.50452.10051.07932.15496.38905.00942.5721
H134.76704.05502.79562.11863.17554.41753.22522.15321.00684.83475.34562.5721

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 128.866 N1 C2 H10 115.025
N1 C6 C5 119.690 N1 C6 H11 117.571
C2 N1 C6 117.809 C2 N3 C4 111.503
N3 C2 H10 116.109 N3 C4 C5 126.149
N3 C4 N9 128.600 C4 C5 C6 115.984
C4 C5 N7 111.422 C4 N9 C8 105.569
C4 N9 H13 126.453 C5 C4 N9 105.252
C5 C6 H11 122.740 C5 N7 C8 102.915
C6 C5 N7 132.594 N7 C8 N9 114.842
N7 C8 H12 123.435 C8 N9 H13 127.978
N9 C8 H12 121.722
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at B3PW91/6-311G** Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 N -0.335      
2 C 0.129      
3 N -0.345      
4 C 0.421      
5 C -0.107      
6 C 0.164      
7 N -0.346      
8 C 0.199      
9 N -0.427      
10 H 0.130      
11 H 0.136      
12 H 0.133      
13 H 0.249      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  2.218 2.984 0.000 3.718
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -49.920 6.184 0.000
y 6.184 -46.939 0.000
z 0.000 0.000 -51.593
Traceless
 xyz
x -0.654 6.184 0.000
y 6.184 3.818 0.000
z 0.000 0.000 -3.163
Polar
3z2-r2-6.327
x2-y2-2.981
xy6.184
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 15.089 1.389 0.000
y 1.389 11.740 0.000
z 0.000 0.000 5.107


<r2> (average value of r2) Å2
<r2> 252.813
(<r2>)1/2 15.900