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All results from a given calculation for C5H4N4 (purine)

using model chemistry: MP2=FULL/6-311G**

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at MP2=FULL/6-311G**
 hartrees
Energy at 0K-411.076334
Energy at 298.15K-411.084156
HF Energy-409.555491
Nuclear repulsion energy412.079060
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at MP2=FULL/6-311G**
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3686 3497 113.96      
2 A' 3282 3114 0.32      
3 A' 3229 3063 14.17      
4 A' 3211 3046 9.85      
5 A' 1665 1579 41.41      
6 A' 1631 1547 33.11      
7 A' 1512 1435 24.74      
8 A' 1500 1423 19.28      
9 A' 1449 1374 70.82      
10 A' 1433 1359 11.31      
11 A' 1398 1326 63.40      
12 A' 1352 1282 33.28      
13 A' 1329 1261 8.47      
14 A' 1287 1221 26.28      
15 A' 1211 1148 5.34      
16 A' 1130 1072 8.79      
17 A' 1105 1048 7.52      
18 A' 945 897 0.39      
19 A' 917 870 12.50      
20 A' 805 764 11.17      
21 A' 658 624 0.67      
22 A' 568 539 3.82      
23 A' 440 417 13.94      
24 A" 965 916 0.22      
25 A" 912 866 16.13      
26 A" 865 821 11.18      
27 A" 770 730 2.87      
28 A" 663 629 1.45      
29 A" 618 587 36.67      
30 A" 513 487 88.09      
31 A" 414 392 2.56      
32 A" 240 227 0.53      
33 A" 228 216 4.50      

Unscaled Zero Point Vibrational Energy (zpe) 20965.0 cm-1
Scaled (by 0.9486) Zero Point Vibrational Energy (zpe) 19887.4 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at MP2=FULL/6-311G**
ABC
0.13707 0.05863 0.04107

See section I.F.4 to change rotational constant units
Geometric Data calculated at MP2=FULL/6-311G**

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.813 -1.263 0.000
C2 -2.103 0.064 0.000
N3 -1.273 1.104 0.000
C4 0.000 0.706 0.000
C5 0.455 -0.626 0.000
C6 -0.533 -1.616 0.000
N7 1.834 -0.693 0.000
C8 2.178 0.578 0.000
N9 1.125 1.472 0.000
H10 -3.161 0.299 0.000
H11 -0.302 -2.677 0.000
H12 3.203 0.916 0.000
H13 1.165 2.480 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.35822.42772.67642.35571.32753.69064.39454.01362.06362.06955.46864.7826
C21.35821.33102.19932.64992.29934.00914.31183.52211.08333.27995.37474.0642
N32.42771.33101.33382.44512.81863.58913.49062.42622.05193.90394.48052.7993
C42.67642.19931.33381.40742.38222.30662.18141.36093.18673.39673.21022.1220
C52.35572.64992.44511.40741.39881.38012.10132.20183.73242.18663.15073.1856
C61.32752.29932.81862.38221.39882.54013.48713.50453.25171.08634.51294.4335
N73.69064.00913.58912.30661.38012.54011.31692.27795.09212.91482.11263.2428
C84.39454.31183.49062.18142.10133.48711.31691.38085.34564.09191.07982.1548
N94.01363.52212.42621.36092.20183.50452.27791.38084.44324.38742.15151.0089
H102.06361.08332.05193.18673.73243.25175.09215.34564.44324.12726.39384.8439
H112.06953.27993.90393.39672.18661.08632.91484.09194.38744.12725.01915.3614
H125.46865.37474.48053.21023.15074.51292.11261.07982.15156.39385.01912.5699
H134.78264.06422.79932.12203.18564.43353.24282.15481.00894.84395.36142.5699

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 129.045 N1 C2 H10 114.932
N1 C6 C5 119.535 N1 C6 H11 117.696
C2 N1 C6 117.769 C2 N3 C4 111.240
N3 C2 H10 116.023 N3 C4 C5 126.227
N3 C4 N9 128.408 C4 C5 C6 116.183
C4 C5 N7 111.674 C4 N9 C8 105.429
C4 N9 H13 126.487 C5 C4 N9 105.365
C5 C6 H11 122.769 C5 N7 C8 102.339
C6 C5 N7 132.143 N7 C8 N9 115.193
N7 C8 H12 123.343 C8 N9 H13 128.084
N9 C8 H12 121.464
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability