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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: HF/6-31G**

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at HF/6-31G**
 hartrees
Energy at 0K-593.860824
Energy at 298.15K-593.874052
Nuclear repulsion energy287.563029
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at HF/6-31G**
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3247 2931 58.79      
2 A' 3221 2908 43.94      
3 A' 3187 2877 38.86      
4 A' 3178 2868 35.05      
5 A' 3172 2863 39.32      
6 A' 3163 2855 9.98      
7 A' 2889 2608 19.85      
8 A' 1641 1481 3.70      
9 A' 1632 1473 0.03      
10 A' 1623 1465 4.44      
11 A' 1621 1463 0.17      
12 A' 1618 1460 0.03      
13 A' 1555 1403 0.18      
14 A' 1550 1399 2.98      
15 A' 1510 1363 13.49      
16 A' 1438 1298 13.43      
17 A' 1366 1233 21.07      
18 A' 1231 1111 3.82      
19 A' 1136 1026 0.13      
20 A' 1133 1022 0.26      
21 A' 1096 989 0.50      
22 A' 972 877 0.11      
23 A' 951 859 3.41      
24 A' 801 723 6.30      
25 A' 471 425 1.56      
26 A' 371 335 0.31      
27 A' 266 240 1.39      
28 A' 124 112 1.21      
29 A" 3277 2958 39.94      
30 A" 3244 2928 106.38      
31 A" 3228 2913 22.02      
32 A" 3206 2894 10.02      
33 A" 3187 2876 1.16      
34 A" 1627 1469 5.32      
35 A" 1448 1307 0.44      
36 A" 1447 1306 0.56      
37 A" 1400 1264 0.10      
38 A" 1332 1202 0.18      
39 A" 1185 1069 1.30      
40 A" 1045 943 0.04      
41 A" 910 822 0.91      
42 A" 816 736 0.04      
43 A" 784 708 2.59      
44 A" 264 238 0.05      
45 A" 205 185 18.90      
46 A" 152 137 2.00      
47 A" 108 97 3.38      
48 A" 69 62 2.10      

Unscaled Zero Point Vibrational Energy (zpe) 37544.9 cm-1
Scaled (by 0.9026) Zero Point Vibrational Energy (zpe) 33888.0 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at HF/6-31G**
ABC
0.48425 0.02662 0.02583

See section I.F.4 to change rotational constant units
Geometric Data calculated at HF/6-31G**

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -2.444 1.631 0.000
H2 -3.665 1.109 0.000
C3 -1.498 0.066 0.000
H4 -1.767 -0.507 0.878
H5 -1.767 -0.507 -0.878
C6 0.000 0.363 0.000
H7 0.247 0.963 -0.872
H8 0.247 0.963 0.872
C9 0.841 -0.915 0.000
H10 0.586 -1.516 0.872
H11 0.586 -1.516 -0.872
C12 2.345 -0.641 0.000
H13 2.601 -0.040 0.871
H14 2.601 -0.040 -0.871
C15 3.185 -1.917 0.000
H16 2.977 -2.524 0.877
H17 2.977 -2.524 -0.877
H18 4.246 -1.689 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.32741.82812.40832.40832.75332.90712.90714.15624.45464.45465.30085.38555.38556.65356.88566.88567.4682
H21.32742.40412.64232.64233.73974.01064.01064.93925.07115.07116.25946.42946.42947.48787.62037.62038.3905
C31.82812.40411.08301.08301.52722.14742.14742.53672.75812.75813.90814.19214.19215.08555.24415.24416.0062
H42.40832.64231.08301.75682.15693.04712.49382.78242.56053.10144.20784.39344.72885.22325.15485.44566.1909
H52.40832.64231.08301.75682.15692.49383.04712.78243.10142.56054.20784.72884.39345.22325.44565.15486.1909
C62.75333.73971.52722.15692.15691.08721.08721.53012.15282.15282.55112.77252.77253.91674.23814.23814.7156
H72.90714.01062.14743.04712.49381.08721.74482.15423.04982.50192.78093.09592.55854.20494.76074.42754.8764
H82.90714.01062.14742.49383.04711.08721.74482.15422.50193.04982.78092.55853.09594.20494.42754.76074.8764
C94.15624.93922.53672.78242.78241.53012.15422.15421.08901.08901.52952.15012.15012.54882.81372.81373.4917
H104.45465.07112.75812.56053.10142.15283.04982.50191.08901.74342.15022.49823.04582.77032.59443.12883.7664
H114.45465.07112.75813.10142.56052.15282.50193.04981.08901.74342.15023.04582.49822.77033.12882.59443.7664
C125.30086.25943.90814.20784.20782.55112.78092.78091.52952.15022.15021.08821.08821.52772.17112.17112.1703
H135.38556.42944.19214.39344.72882.77253.09592.55852.15012.49823.04581.08821.74152.14992.51173.06012.4863
H145.38556.42944.19214.72884.39342.77252.55853.09592.15013.04582.49821.08821.74152.14993.06012.51172.4863
C156.65357.48785.08555.22325.22323.91674.20494.20492.54882.77032.77031.52772.14992.14991.08651.08651.0855
H166.88567.62035.24415.15485.44564.23814.76074.42752.81372.59443.12882.17112.51173.06011.08651.75451.7542
H176.88567.62035.24415.44565.15484.23814.42754.76072.81373.12882.59442.17113.06012.51171.08651.75451.7542
H187.46828.39056.00626.19096.19094.71564.87644.87643.49173.76643.76642.17032.48632.48631.08551.75421.7542

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 108.933 S1 C3 H5 108.933
S1 C3 C6 109.961 H2 S1 C3 98.004
C3 C6 H7 109.287 C3 C6 H8 109.287
C3 C6 C9 112.140 H4 C3 H5 108.404
H4 C3 C6 110.285 H5 C3 C6 110.285
C6 C9 H10 109.404 C6 C9 H11 109.404
C6 C9 C12 112.982 H7 C6 H8 106.732
H7 C6 C9 109.623 H8 C6 C9 109.623
C9 C12 H13 109.287 C9 C12 H14 109.287
C9 C12 C15 112.961 H10 C9 H11 106.343
H10 C9 C12 109.245 H11 C9 C12 109.245
C12 C15 H16 111.180 C12 C15 H17 111.180
C12 C15 H18 111.173 H13 C12 H14 106.299
H13 C12 C15 109.395 H14 C12 C15 109.395
H16 C15 H17 107.680 H16 C15 H18 107.729
H17 C15 H18 107.729
Electronic energy levels

Electronic state

Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at HF/6-31G** Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S -0.018 -0.395    
2 H 0.043 0.213    
3 C -0.366 -0.102    
4 H 0.146 0.069    
5 H 0.146 0.069    
6 C -0.229 0.192    
7 H 0.129 0.010    
8 H 0.129 0.010    
9 C -0.209 -0.218    
10 H 0.109 0.042    
11 H 0.109 0.042    
12 C -0.215 0.240    
13 H 0.111 -0.055    
14 H 0.111 -0.055    
15 C -0.334 -0.146    
16 H 0.111 0.028    
17 H 0.111 0.028    
18 H 0.115 0.027    


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  0.370 -1.850 0.000 1.887
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -45.655 3.962 0.000
y 3.962 -52.495 0.000
z 0.000 0.000 -48.883
Traceless
 xyz
x 5.034 3.962 0.000
y 3.962 -5.226 0.000
z 0.000 0.000 0.193
Polar
3z2-r20.385
x2-y26.840
xy3.962
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 11.953 -1.656 0.000
y -1.656 10.035 0.000
z 0.000 0.000 8.372


<r2> (average value of r2) Å2
<r2> 411.851
(<r2>)1/2 20.294