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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: BLYP/6-31G**

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at BLYP/6-31G**
 hartrees
Energy at 0K-595.804607
Energy at 298.15K-595.817265
Nuclear repulsion energy283.386508
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at BLYP/6-31G**
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3033 3010 42.25      
2 A' 2986 2963 41.62      
3 A' 2964 2941 42.70      
4 A' 2960 2937 30.59      
5 A' 2948 2925 22.35      
6 A' 2936 2913 7.29      
7 A' 2590 2570 25.00      
8 A' 1491 1480 2.09      
9 A' 1481 1470 0.13      
10 A' 1468 1457 0.65      
11 A' 1464 1453 1.88      
12 A' 1460 1449 0.28      
13 A' 1394 1383 0.53      
14 A' 1367 1357 0.09      
15 A' 1345 1334 12.63      
16 A' 1282 1272 6.88      
17 A' 1218 1208 34.35      
18 A' 1104 1096 2.94      
19 A' 1029 1021 0.42      
20 A' 1022 1014 1.23      
21 A' 988 981 0.23      
22 A' 880 874 0.51      
23 A' 830 823 1.30      
24 A' 690 685 5.90      
25 A' 424 421 1.78      
26 A' 335 333 0.30      
27 A' 238 236 1.40      
28 A' 114 113 1.08      
29 A" 3040 3017 39.26      
30 A" 3028 3005 57.67      
31 A" 2999 2976 35.86      
32 A" 2981 2958 10.81      
33 A" 2961 2938 1.15      
34 A" 1480 1469 4.75      
35 A" 1306 1296 0.15      
36 A" 1302 1292 0.58      
37 A" 1258 1248 0.20      
38 A" 1195 1186 0.10      
39 A" 1055 1047 1.67      
40 A" 944 937 0.07      
41 A" 826 819 1.66      
42 A" 748 742 0.15      
43 A" 725 720 4.23      
44 A" 248 246 0.01      
45 A" 187 185 16.33      
46 A" 147 146 1.31      
47 A" 100 99 2.36      
48 A" 66 65 1.59      

Unscaled Zero Point Vibrational Energy (zpe) 34318.1 cm-1
Scaled (by 0.9923) Zero Point Vibrational Energy (zpe) 34053.8 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at BLYP/6-31G**
ABC
0.46934 0.02588 0.02511

See section I.F.4 to change rotational constant units
Geometric Data calculated at BLYP/6-31G**

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -2.468 1.680 0.000
H2 -3.711 1.126 0.000
C3 -1.512 0.067 0.000
H4 -1.796 -0.509 0.894
H5 -1.796 -0.509 -0.894
C6 0.000 0.357 0.000
H7 0.255 0.967 -0.885
H8 0.255 0.967 0.885
C9 0.848 -0.936 0.000
H10 0.586 -1.547 0.884
H11 0.586 -1.547 -0.884
C12 2.371 -0.668 0.000
H13 2.632 -0.056 0.883
H14 2.632 -0.056 -0.883
C15 3.216 -1.959 0.000
H16 3.004 -2.575 0.889
H17 3.004 -2.575 -0.889
H18 4.294 -1.732 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.36061.87412.45752.45752.79962.95062.95064.22344.53004.53005.37795.45895.45896.74836.98836.98837.5739
H21.36062.44002.67132.67133.78934.06654.06655.00355.13715.13716.34046.51196.51197.58227.71867.71868.4997
C31.87412.44001.10081.10081.53972.17162.17162.56492.79142.79143.95194.23894.23895.14385.30775.30776.0788
H42.45752.67131.10081.78742.18543.09052.52712.82412.59903.14884.26474.45134.79275.29365.22635.52216.2760
H52.45752.67131.10081.78742.18542.52713.09052.82413.14882.59904.26474.79274.45135.29365.52215.22636.2760
C62.79963.78931.53972.18542.18541.10451.10451.54672.18012.18012.58302.80672.80673.96304.29154.29154.7756
H72.95064.06652.17163.09052.52711.10451.77042.18073.09192.53572.81643.13402.58764.25524.82214.48374.9378
H82.95064.06652.17162.52713.09051.10451.77042.18072.53573.09192.81642.58763.13404.25524.48374.82214.9378
C94.22345.00352.56492.82412.82411.54672.18072.18071.10641.10641.54562.17572.17572.57892.85062.85063.5366
H104.53005.13712.79142.59903.14882.18013.09192.53571.10641.76802.17682.53133.08702.80462.62743.16993.8163
H114.53005.13712.79143.14882.59902.18012.53573.09191.10641.76802.17683.08702.53132.80463.16992.62743.8163
C125.37796.34043.95194.26474.26472.58302.81642.81641.54562.17682.17681.10541.10541.54262.19772.19772.1982
H135.45896.51194.23894.45134.79272.80673.13402.58762.17572.53133.08701.10541.76582.17692.54643.10242.5202
H145.45896.51194.23894.79274.45132.80672.58763.13402.17573.08702.53131.10541.76582.17693.10242.54642.5202
C156.74837.58225.14385.29365.29363.96304.25524.25522.57892.80462.80461.54262.17692.17691.10291.10291.1017
H166.98837.71865.30775.22635.52214.29154.82214.48372.85062.62743.16992.19772.54643.10241.10291.77871.7794
H176.98837.71865.30775.52215.22634.29154.48374.82212.85063.16992.62742.19773.10242.54641.10291.77871.7794
H187.57398.49976.07886.27606.27604.77564.93784.93783.53663.81633.81632.19822.52022.52021.10171.77941.7794

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 108.591 S1 C3 H5 108.591
S1 C3 C6 109.798 H2 S1 C3 96.642
C3 C6 H7 109.318 C3 C6 H8 109.318
C3 C6 C9 112.409 H4 C3 H5 108.565
H4 C3 C6 110.620 H5 C3 C6 110.620
C6 C9 H10 109.394 C6 C9 H11 109.394
C6 C9 C12 113.292 H7 C6 H8 106.534
H7 C6 C9 109.545 H8 C6 C9 109.545
C9 C12 H13 109.183 C9 C12 H14 109.183
C9 C12 C15 113.250 H10 C9 H11 106.076
H10 C9 C12 109.215 H11 C9 C12 109.215
C12 C15 H16 111.265 C12 C15 H17 111.265
C12 C15 H18 111.374 H13 C12 H14 106.010
H13 C12 C15 109.480 H14 C12 C15 109.480
H16 C15 H17 107.486 H16 C15 H18 107.628
H17 C15 H18 107.628
Electronic energy levels

Electronic state

Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at BLYP/6-31G** Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S -0.064      
2 H 0.051      
3 C -0.291      
4 H 0.120      
5 H 0.120      
6 C -0.151      
7 H 0.097      
8 H 0.097      
9 C -0.139      
10 H 0.077      
11 H 0.077      
12 C -0.142      
13 H 0.081      
14 H 0.081      
15 C -0.285      
16 H 0.091      
17 H 0.091      
18 H 0.089      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  0.403 -1.780 0.000 1.825
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -44.998 3.691 0.000
y 3.691 -51.598 0.000
z 0.000 0.000 -48.518
Traceless
 xyz
x 5.060 3.691 0.000
y 3.691 -4.840 0.000
z 0.000 0.000 -0.219
Polar
3z2-r2-0.439
x2-y26.600
xy3.691
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 0.000 0.000 0.000
y 0.000 0.000 0.000
z 0.000 0.000 0.000


<r2> (average value of r2) Å2
<r2> 422.303
(<r2>)1/2 20.550