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All results from a given calculation for C5H4N4 (purine)

using model chemistry: CCD/6-31G**

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at CCD/6-31G**
 hartrees
Energy at 0K-410.778291
Energy at 298.15K-410.786144
HF Energy-409.477391
Nuclear repulsion energy412.454021
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at CCD/6-31G**
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3775 3539 113.47      
2 A' 3329 3121 1.75      
3 A' 3274 3069 19.43      
4 A' 3263 3059 12.98      
5 A' 1721 1613 61.08      
6 A' 1687 1582 68.57      
7 A' 1595 1496 31.45      
8 A' 1549 1452 20.62      
9 A' 1485 1393 90.47      
10 A' 1470 1378 6.53      
11 A' 1412 1324 57.98      
12 A' 1360 1275 15.60      
13 A' 1332 1249 5.60      
14 A' 1265 1186 55.75      
15 A' 1241 1163 2.42      
16 A' 1159 1087 8.31      
17 A' 1123 1053 13.67      
18 A' 964 904 0.19      
19 A' 933 875 14.76      
20 A' 822 771 13.90      
21 A' 669 628 0.43      
22 A' 579 543 3.35      
23 A' 447 419 13.27      
24 A" 1001 939 0.13      
25 A" 936 878 11.02      
26 A" 898 842 7.85      
27 A" 751 704 5.61      
28 A" 669 627 4.35      
29 A" 617 578 32.67      
30 A" 496 465 115.51      
31 A" 419 393 6.17      
32 A" 247 232 0.15      
33 A" 230 215 3.93      

Unscaled Zero Point Vibrational Energy (zpe) 21358.3 cm-1
Scaled (by 0.9376) Zero Point Vibrational Energy (zpe) 20025.5 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at CCD/6-31G**
ABC
0.13791 0.05853 0.04109

See section I.F.4 to change rotational constant units
Geometric Data calculated at CCD/6-31G**

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.813 -1.260 0.000
C2 -2.102 0.064 0.000
N3 -1.274 1.100 0.000
C4 0.000 0.703 0.000
C5 0.451 -0.621 0.000
C6 -0.536 -1.609 0.000
N7 1.836 -0.688 0.000
C8 2.180 0.572 0.000
N9 1.127 1.467 0.000
H10 -3.155 0.300 0.000
H11 -0.306 -2.666 0.000
H12 3.202 0.906 0.000
H13 1.169 2.471 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.35572.42112.67222.35311.32413.69404.39314.01002.05812.06115.46284.7767
C21.35571.32622.19692.64382.29204.00964.31193.52031.07913.26825.37024.0613
N32.42111.32621.33442.43672.80793.58753.49392.42842.04423.88864.47982.8015
C42.67222.19691.33441.39812.37302.30342.18371.36153.18073.38273.20812.1200
C52.35312.64382.43671.39811.39701.38652.09972.19423.72222.18123.14563.1739
C61.32412.29202.80792.37301.39702.54463.48283.49663.24131.08184.50504.4221
N73.69404.00963.58752.30341.38652.54461.30562.26895.08832.91592.09903.2288
C84.39314.31193.49392.18372.09973.48281.30561.38245.34184.08191.07522.1516
N94.01003.52032.42841.36152.19423.49662.26891.38244.43794.37452.14961.0049
H102.05811.07912.04423.18073.72223.24135.08835.34184.43794.11306.38564.8386
H112.06113.26823.88863.38272.18121.08182.91594.08194.37454.11305.00655.3448
H125.46285.37024.47983.20813.14564.50502.09901.07522.14966.38565.00652.5652
H134.77674.06132.80152.12003.17394.42213.22882.15161.00494.83865.34482.5652

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 129.046 N1 C2 H10 114.937
N1 C6 C5 119.689 N1 C6 H11 117.540
C2 N1 C6 117.582 C2 N3 C4 111.319
N3 C2 H10 116.017 N3 C4 C5 126.162
N3 C4 N9 128.515 C4 C5 C6 116.201
C4 C5 N7 111.621 C4 N9 C8 105.469
C4 N9 H13 126.586 C5 C4 N9 105.323
C5 C6 H11 122.771 C5 N7 C8 102.469
C6 C5 N7 132.178 N7 C8 N9 115.118
N7 C8 H12 123.381 C8 N9 H13 127.945
N9 C8 H12 121.501
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability