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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: HF/TZVP

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at HF/TZVP
 hartrees
Energy at 0K-593.929453
Energy at 298.15K-593.942684
HF Energy-593.929453
Nuclear repulsion energy287.614945
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at HF/TZVP
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3221 2927 64.50      
2 A' 3209 2915 42.12      
3 A' 3171 2881 40.21      
4 A' 3160 2871 32.28      
5 A' 3155 2867 44.61      
6 A' 3146 2859 8.84      
7 A' 2845 2585 11.27      
8 A' 1635 1486 6.87      
9 A' 1625 1477 0.14      
10 A' 1617 1469 3.68      
11 A' 1615 1467 0.11      
12 A' 1611 1463 0.31      
13 A' 1544 1403 0.06      
14 A' 1540 1399 3.26      
15 A' 1502 1365 11.58      
16 A' 1430 1299 12.43      
17 A' 1358 1234 22.10      
18 A' 1225 1113 3.00      
19 A' 1128 1025 0.04      
20 A' 1125 1022 0.10      
21 A' 1087 988 0.47      
22 A' 966 878 0.19      
23 A' 940 854 2.60      
24 A' 791 718 6.07      
25 A' 469 426 1.47      
26 A' 370 336 0.28      
27 A' 264 240 1.31      
28 A' 123 112 1.22      
29 A" 3260 2962 38.39      
30 A" 3221 2926 124.63      
31 A" 3206 2913 13.13      
32 A" 3183 2892 7.94      
33 A" 3164 2875 1.11      
34 A" 1617 1469 6.61      
35 A" 1441 1310 0.02      
36 A" 1441 1309 1.01      
37 A" 1394 1267 0.11      
38 A" 1327 1206 0.31      
39 A" 1174 1067 1.87      
40 A" 1041 946 0.11      
41 A" 908 825 0.82      
42 A" 817 742 0.06      
43 A" 786 714 2.41      
44 A" 261 237 0.09      
45 A" 209 190 19.68      
46 A" 149 135 1.44      
47 A" 105 95 2.91      
48 A" 67 61 2.09      

Unscaled Zero Point Vibrational Energy (zpe) 37320.1 cm-1
Scaled (by 0.9086) Zero Point Vibrational Energy (zpe) 33909.0 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at HF/TZVP
ABC
0.48391 0.02664 0.02584

See section I.F.4 to change rotational constant units
Geometric Data calculated at HF/TZVP

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -2.577 1.302 0.000
H2 -3.602 0.859 0.000
C3 -1.470 0.000 0.000
H4 -1.663 -0.607 0.903
H5 -1.663 -0.607 -0.903
C6 0.000 0.421 0.000
H7 0.195 1.033 -0.862
H8 0.195 1.033 0.862
C9 0.906 -0.807 0.000
H10 0.712 -1.412 0.883
H11 0.712 -1.412 -0.883
C12 2.380 -0.389 0.000
H13 2.588 0.199 0.889
H14 2.588 0.199 -0.889
C15 3.291 -1.617 0.000
H16 3.101 -2.230 0.862
H17 3.101 -2.230 -0.862
H18 4.335 -1.311 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.11631.70912.30202.30202.72362.91572.91574.07294.35484.35485.23765.35575.35576.55416.74246.74247.3895
H21.11632.29782.59322.59323.62813.89713.89714.80634.95394.95396.11026.28756.28757.32367.43017.43018.2276
C31.70912.29781.10541.10541.52952.14072.14072.51032.74502.74503.86974.15894.15895.02825.15865.15865.9512
H42.30202.59321.10541.80632.15403.04282.47852.73082.50723.07834.14804.32634.68285.13555.03255.33306.1058
H52.30202.59321.10541.80632.15402.47853.04282.73083.07832.50724.14804.68284.32635.13555.33305.03256.1058
C62.72363.62811.52952.15402.15401.07491.07491.52712.15592.15592.51392.74512.74513.87104.16994.16994.6681
H72.91573.89712.14073.04282.47851.07491.72502.15333.04812.49882.74563.08022.53394.16534.69724.36914.8348
H82.91573.89712.14072.47853.04281.07491.72502.15332.49883.04812.74562.53393.08024.16534.36914.69724.8348
C94.07294.80632.51032.73082.73081.52712.15332.15331.08781.08781.53152.15152.15152.51792.75352.75353.4649
H104.35484.95392.74502.50723.07832.15593.04812.49881.08781.76622.14702.47273.04222.73382.52533.06973.7304
H114.35484.95392.74503.07832.50722.15592.49883.04811.08781.76622.14703.04222.47272.73383.06972.52533.7304
C125.23766.11023.86974.14804.14802.51392.74562.74561.53152.14702.14701.08581.08581.52922.15712.15712.1615
H135.35576.28754.15894.32634.68282.74513.08022.53392.15152.47273.04221.08581.77802.14072.48273.03812.4744
H145.35576.28754.15894.68284.32632.74512.53393.08022.15153.04222.47271.08581.77802.14073.03812.48272.4744
C156.55417.32365.02825.13555.13553.87104.16534.16532.51792.73382.73381.52922.14072.14071.07491.07491.0878
H166.74247.43015.15865.03255.33304.16994.69724.36912.75352.52533.06972.15712.48273.03811.07491.72461.7636
H176.74247.43015.15865.33305.03254.16994.36914.69722.75353.06972.52532.15713.03812.48271.07491.72461.7636
H187.38958.22765.95126.10586.10584.66814.83484.83483.46493.73043.73042.16152.47442.47441.08781.76361.7636

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 107.818 S1 C3 H5 107.818
S1 C3 C6 114.377 H2 S1 C3 106.957
C3 C6 H7 109.323 C3 C6 H8 109.323
C3 C6 C9 110.425 H4 C3 H5 109.573
H4 C3 C6 108.595 H5 C3 C6 108.595
C6 C9 H10 109.931 C6 C9 H11 109.931
C6 C9 C12 110.552 H7 C6 H8 106.717
H7 C6 C9 110.486 H8 C6 C9 110.486
C9 C12 H13 109.394 C9 C12 H14 109.394
C9 C12 C15 110.701 H10 C9 H11 108.546
H10 C9 C12 108.921 H11 C9 C12 108.921
C12 C15 H16 110.651 C12 C15 H17 110.651
C12 C15 H18 110.229 H13 C12 H14 109.918
H13 C12 C15 108.710 H14 C12 C15 108.710
H16 C15 H17 106.690 H16 C15 H18 109.271
H17 C15 H18 109.271
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at HF/TZVP Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S -0.142      
2 H 0.056      
3 C -0.145      
4 H 0.095      
5 H 0.095      
6 C -0.119      
7 H 0.077      
8 H 0.077      
9 C -0.134      
10 H 0.061      
11 H 0.061      
12 C -0.081      
13 H 0.064      
14 H 0.064      
15 C -0.265      
16 H 0.073      
17 H 0.073      
18 H 0.092      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  0.369 -1.832 0.000 1.869
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -45.768 4.005 0.000
y 4.005 -52.746 0.000
z 0.000 0.000 -48.848
Traceless
 xyz
x 5.029 4.005 0.000
y 4.005 -5.438 0.000
z 0.000 0.000 0.409
Polar
3z2-r20.818
x2-y26.978
xy4.005
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 12.868 -1.881 0.000
y -1.881 11.150 0.000
z 0.000 0.000 8.920


<r2> (average value of r2) Å2
<r2> 411.685
(<r2>)1/2 20.290