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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: HF/Def2TZVPP

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at HF/Def2TZVPP
 hartrees
Energy at 0K-593.948617
Energy at 298.15K-593.961850
HF Energy-593.948617
Nuclear repulsion energy288.209430
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at HF/Def2TZVPP
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3214 2913 62.37      
2 A' 3197 2897 42.38      
3 A' 3160 2864 41.91      
4 A' 3154 2859 39.33      
5 A' 3146 2852 32.91      
6 A' 3138 2844 8.63      
7 A' 2854 2587 6.75      
8 A' 1632 1479 6.97      
9 A' 1622 1470 0.08      
10 A' 1613 1462 4.05      
11 A' 1610 1460 0.16      
12 A' 1607 1456 0.18      
13 A' 1542 1398 0.06      
14 A' 1538 1394 2.71      
15 A' 1501 1360 8.50      
16 A' 1428 1295 8.37      
17 A' 1357 1230 19.33      
18 A' 1224 1109 2.72      
19 A' 1129 1024 0.07      
20 A' 1126 1021 0.07      
21 A' 1088 986 0.39      
22 A' 966 876 0.19      
23 A' 942 854 1.69      
24 A' 794 720 5.00      
25 A' 468 425 1.29      
26 A' 370 335 0.24      
27 A' 264 240 1.09      
28 A' 124 112 1.06      
29 A" 3245 2942 39.05      
30 A" 3212 2912 111.95      
31 A" 3195 2896 18.97      
32 A" 3173 2876 6.35      
33 A" 3153 2858 0.85      
34 A" 1615 1463 6.28      
35 A" 1442 1307 0.24      
36 A" 1440 1305 0.59      
37 A" 1393 1263 0.09      
38 A" 1327 1203 0.25      
39 A" 1172 1062 1.63      
40 A" 1039 942 0.09      
41 A" 907 822 0.85      
42 A" 814 738 0.03      
43 A" 784 710 2.69      
44 A" 264 239 0.06      
45 A" 209 190 15.22      
46 A" 150 136 1.41      
47 A" 108 98 2.67      
48 A" 68 62 1.94      

Unscaled Zero Point Vibrational Energy (zpe) 37257.6 cm-1
Scaled (by 0.9064) Zero Point Vibrational Energy (zpe) 33770.3 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at HF/Def2TZVPP
ABC
0.48589 0.02675 0.02595

See section I.F.4 to change rotational constant units
Geometric Data calculated at HF/Def2TZVPP

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -2.433 1.645 0.000
H2 -3.665 1.153 0.000
C3 -1.500 0.079 0.000
H4 -1.777 -0.489 0.876
H5 -1.777 -0.489 -0.876
C6 0.000 0.358 0.000
H7 0.252 0.956 -0.870
H8 0.252 0.956 0.870
C9 0.838 -0.919 0.000
H10 0.579 -1.518 0.869
H11 0.579 -1.518 -0.869
C12 2.342 -0.658 0.000
H13 2.601 -0.059 0.868
H14 2.601 -0.059 -0.868
C15 3.174 -1.935 0.000
H16 2.963 -2.540 0.875
H17 2.963 -2.540 -0.875
H18 4.235 -1.716 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.32551.82282.39802.39802.75282.90562.90564.15624.45394.45395.30165.38525.38526.65316.88456.88457.4676
H21.32552.41682.65102.65103.74994.01674.01674.95645.08975.08976.27376.44036.44037.50407.63737.63738.4047
C31.82282.41681.08011.08011.52522.14292.14292.54172.76222.76223.91164.19344.19345.08965.24785.24786.0092
H42.39802.65101.08011.75162.15423.04122.49042.79072.57133.10754.21424.39844.73155.23195.16445.45326.1981
H52.39802.65101.08011.75162.15422.49043.04122.79073.10752.57134.21424.73154.39845.23195.45325.16446.1981
C62.75283.74991.52522.15422.15421.08501.08501.52732.14722.14722.55282.77332.77333.91604.23564.23564.7157
H72.90564.01672.14293.04122.49041.08501.73922.14813.04152.49552.78003.09302.55874.20174.75514.42344.8745
H82.90564.01672.14292.49043.04121.08501.73922.14812.49553.04152.78002.55873.09304.20174.42344.75514.8745
C94.15624.95642.54172.79072.79071.52732.14812.14811.08671.08671.52662.14492.14492.54802.81222.81223.4896
H104.45395.08972.76222.57133.10752.14723.04152.49551.08671.73832.14512.49263.03832.76822.59323.12523.7628
H114.45395.08972.76223.10752.57132.14722.49553.04151.08671.73832.14513.03832.49262.76823.12522.59323.7628
C125.30166.27373.91164.21424.21422.55282.78002.78001.52662.14512.14511.08591.08591.52452.16602.16602.1688
H135.38526.44034.19344.39844.73152.77333.09302.55872.14492.49263.03831.08591.73642.14512.50643.05312.4839
H145.38526.44034.19344.73154.39842.77332.55873.09302.14493.03832.49261.08591.73642.14513.05312.50642.4839
C156.65317.50405.08965.23195.23193.91604.20174.20172.54802.76822.76821.52452.14512.14511.08431.08431.0832
H166.88457.63735.24785.16445.45324.23564.75514.42342.81222.59323.12522.16602.50643.05311.08431.75031.7499
H176.88457.63735.24785.45325.16444.23564.42344.75512.81223.12522.59322.16603.05312.50641.08431.75031.7499
H187.46768.40476.00926.19816.19814.71574.87454.87453.48963.76283.76282.16882.48392.48391.08321.74991.7499

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 108.677 S1 C3 H5 108.677
S1 C3 C6 110.299 H2 S1 C3 99.064
C3 C6 H7 109.205 C3 C6 H8 109.205
C3 C6 C9 112.748 H4 C3 H5 108.360
H4 C3 C6 110.386 H5 C3 C6 110.386
C6 C9 H10 109.300 C6 C9 H11 109.300
C6 C9 C12 113.422 H7 C6 H8 106.548
H7 C6 C9 109.472 H8 C6 C9 109.472
C9 C12 H13 109.210 C9 C12 H14 109.210
C9 C12 C15 113.251 H10 C9 H11 106.218
H10 C9 C12 109.174 H11 C9 C12 109.174
C12 C15 H16 111.127 C12 C15 H17 111.127
C12 C15 H18 111.423 H13 C12 H14 106.174
H13 C12 C15 109.376 H14 C12 C15 109.376
H16 C15 H17 107.631 H16 C15 H18 107.676
H17 C15 H18 107.676
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at HF/Def2TZVPP Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S -0.147      
2 H 0.057      
3 C -0.075      
4 H 0.061      
5 H 0.061      
6 C -0.053      
7 H 0.050      
8 H 0.050      
9 C -0.076      
10 H 0.033      
11 H 0.033      
12 C -0.024      
13 H 0.030      
14 H 0.030      
15 C -0.187      
16 H 0.048      
17 H 0.048      
18 H 0.062      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  0.420 -1.744 0.000 1.794
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -46.105 3.908 0.000
y 3.908 -52.460 0.000
z 0.000 0.000 -48.677
Traceless
 xyz
x 4.464 3.908 0.000
y 3.908 -5.069 0.000
z 0.000 0.000 0.605
Polar
3z2-r21.211
x2-y26.355
xy3.908
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 13.418 -1.971 0.000
y -1.971 11.569 0.000
z 0.000 0.000 9.357


<r2> (average value of r2) Å2
<r2> 410.204
(<r2>)1/2 20.253