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All results from a given calculation for C5H4N4 (purine)

using model chemistry: HSEh1PBE/6-31+G**

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at HSEh1PBE/6-31+G**
 hartrees
Energy at 0K-411.543786
Energy at 298.15K 
HF Energy-411.543786
Nuclear repulsion energy413.324000
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at HSEh1PBE/6-31+G**
Rotational Constants (cm-1) from geometry optimized at HSEh1PBE/6-31+G**
ABC
0.13856 0.05879 0.04128

See section I.F.4 to change rotational constant units
Geometric Data calculated at HSEh1PBE/6-31+G**

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.810 -1.253 0.000
C2 -2.100 0.065 0.000
N3 -1.268 1.096 0.000
C4 0.000 0.702 0.000
C5 0.452 -0.624 0.000
C6 -0.536 -1.608 0.000
N7 1.830 -0.685 0.000
C8 2.177 0.572 0.000
N9 1.124 1.464 0.000
H10 -3.157 0.303 0.000
H11 -0.309 -2.670 0.000
H12 3.204 0.905 0.000
H13 1.167 2.471 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.34962.41122.66502.34871.32323.68474.38563.99992.05802.06415.45964.7685
C21.34961.32462.19442.64342.28984.00074.30703.51471.08383.26895.37024.0574
N32.41121.32461.32822.43312.80123.57403.48552.42102.04833.88644.47692.7969
C42.66502.19441.32821.40142.37102.29652.18131.35833.18223.38653.21072.1193
C52.34872.64342.43311.40141.39391.37912.09892.19393.72652.18323.14843.1769
C61.32322.28982.80122.37101.39392.53923.47973.49173.24381.08644.50564.4200
N73.68474.00073.57402.29651.37912.53921.30372.26235.08412.91852.10173.2254
C84.38564.30703.48552.18132.09893.47971.30371.38065.34124.08561.07982.1519
N93.99993.51472.42101.35832.19393.49172.26231.38064.43614.37602.15391.0080
H102.05801.08382.04833.18223.72653.24385.08415.34124.43614.11696.38984.8372
H112.06413.26893.88643.38652.18321.08642.91854.08564.37604.11695.01285.3493
H125.45965.37024.47693.21073.14844.50562.10171.07982.15396.38985.01282.5699
H134.76854.05742.79692.11933.17694.42003.22542.15191.00804.83725.34932.5699

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 128.752 N1 C2 H10 115.072
N1 C6 C5 119.606 N1 C6 H11 117.544
C2 N1 C6 117.901 C2 N3 C4 111.622
N3 C2 H10 116.176 N3 C4 C5 126.080
N3 C4 N9 128.619 C4 C5 C6 116.039
C4 C5 N7 111.362 C4 N9 C8 105.576
C4 N9 H13 126.551 C5 C4 N9 105.301
C5 C6 H11 122.850 C5 N7 C8 102.918
C6 C5 N7 132.599 N7 C8 N9 114.843
N7 C8 H12 123.443 C8 N9 H13 127.873
N9 C8 H12 121.714
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at HSEh1PBE/6-31+G** Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 N -0.221      
2 C 0.056      
3 N -0.282      
4 C 0.094      
5 C 0.291      
6 C -0.245      
7 N -0.346      
8 C 0.230      
9 N -0.417      
10 H 0.158      
11 H 0.175      
12 H 0.175      
13 H 0.332      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  2.276 3.030 0.000 3.790
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -50.948 6.388 0.000
y 6.388 -47.871 0.000
z 0.000 0.000 -52.439
Traceless
 xyz
x -0.793 6.388 0.000
y 6.388 3.823 0.000
z 0.000 0.000 -3.030
Polar
3z2-r2-6.059
x2-y2-3.077
xy6.388
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 16.097 1.318 0.000
y 1.318 12.871 0.000
z 0.000 0.000 6.417


<r2> (average value of r2) Å2
<r2> 253.574
(<r2>)1/2 15.924