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All results from a given calculation for C5H4N4 (purine)

using model chemistry: CCD/6-31+G**

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at CCD/6-31+G**
 hartrees
Energy at 0K-410.801039
Energy at 298.15K-410.808704
HF Energy-409.487979
Nuclear repulsion energy412.037207
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at CCD/6-31+G**
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3758 3542 114.66      
2 A' 3330 3138 0.54      
3 A' 3280 3091 12.02      
4 A' 3263 3075 8.65      
5 A' 1711 1612 66.58      
6 A' 1679 1582 77.55      
7 A' 1584 1493 36.34      
8 A' 1540 1451 17.09      
9 A' 1478 1392 97.96      
10 A' 1464 1379 6.97      
11 A' 1406 1325 51.92      
12 A' 1353 1275 19.09      
13 A' 1326 1250 4.23      
14 A' 1262 1189 56.69      
15 A' 1236 1165 2.54      
16 A' 1154 1087 9.14      
17 A' 1120 1055 16.89      
18 A' 962 907 0.00      
19 A' 931 877 12.84      
20 A' 819 772 12.12      
21 A' 668 630 0.16      
22 A' 577 544 2.62      
23 A' 449 423 13.97      
24 A" 993 935 0.09      
25 A" 914 862 16.90      
26 A" 886 835 12.10      
27 A" 684 644 10.44      
28 A" 651 613 0.34      
29 A" 590 556 23.82      
30 A" 440 414 98.12      
31 A" 392 369 13.39      
32 A" 230 217 0.39      
33 A" 205 194 5.33      

Unscaled Zero Point Vibrational Energy (zpe) 21167.7 cm-1
Scaled (by 0.9423) Zero Point Vibrational Energy (zpe) 19946.3 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at CCD/6-31+G**
ABC
0.13777 0.05838 0.04100

See section I.F.4 to change rotational constant units
Geometric Data calculated at CCD/6-31+G**

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.814 -1.264 0.000
C2 -2.107 0.062 0.000
N3 -1.276 1.098 0.000
C4 0.000 0.703 0.000
C5 0.452 -0.621 0.000
C6 -0.534 -1.612 0.000
N7 1.839 -0.685 0.000
C8 2.183 0.577 0.000
N9 1.126 1.470 0.000
H10 -3.159 0.297 0.000
H11 -0.304 -2.669 0.000
H12 3.205 0.911 0.000
H13 1.168 2.476 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.35732.42202.67532.35561.32623.69814.40014.01492.06022.06235.46974.7828
C21.35731.32792.20192.64842.29634.01534.32023.52651.07873.27165.37884.0682
N32.42201.32791.33592.43772.80943.58903.49812.43132.04663.89014.48472.8058
C42.67532.20191.33591.39902.37542.30362.18651.36303.18543.38533.21152.1231
C52.35562.64842.43771.39901.39811.38782.10462.19723.72642.18313.15023.1784
C61.32622.29632.80942.37541.39812.54753.48873.50093.24551.08174.51064.4278
N73.69814.01533.58902.30361.38782.54751.30772.26995.09352.92042.10113.2311
C84.40014.32023.49812.18652.10463.48871.30771.38375.34964.08891.07532.1533
N94.01493.52652.43131.36302.19723.50092.26991.38374.44364.37942.15211.0063
H102.06021.07872.04663.18543.72643.24555.09355.34964.44364.11636.39374.8451
H112.06233.27163.89013.38532.18311.08172.92044.08894.37944.11635.01325.3511
H125.46975.37884.48473.21153.15024.51062.10111.07532.15216.39375.01322.5681
H134.78284.06822.80582.12313.17844.42783.23112.15331.00634.84515.35112.5681

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 128.839 N1 C2 H10 115.022
N1 C6 C5 119.661 N1 C6 H11 117.481
C2 N1 C6 117.669 C2 N3 C4 111.506
N3 C2 H10 116.138 N3 C4 C5 126.066
N3 C4 N9 128.531 C4 C5 C6 116.258
C4 C5 N7 111.504 C4 N9 C8 105.506
C4 N9 H13 126.635 C5 C4 N9 105.403
C5 C6 H11 122.858 C5 N7 C8 102.619
C6 C5 N7 132.238 N7 C8 N9 114.968
N7 C8 H12 123.404 C8 N9 H13 127.859
N9 C8 H12 121.628
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability