All results from a given calculation for HO2CCHNH2CH2OH (Serine)
using model chemistry: QCISD/6-31+G**
19 10 17 12 22
States and conformations
| State |
Conformation |
minimum conformation |
conformer description |
state description |
| 1 |
1 |
yes |
C1 |
1A |
Energy calculated at QCISD/6-31+G**
| | hartrees |
| Energy at 0K | -397.935701 |
| Energy at 298.15K | |
| HF Energy | -396.750509 |
| Nuclear repulsion energy | 324.757826 |
The energy at 298.15K was derived from the energy at 0K
and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at QCISD/6-31+G**
Geometric Data calculated at QCISD/6-31+G**
Point Group is C1
Cartesians (Å)
| Atom |
x (Å) |
y (Å) |
z (Å) |
| C1 |
0.795 |
-0.534 |
0.018 |
| O2 |
2.071 |
-0.332 |
-0.384 |
| O3 |
0.426 |
-1.556 |
0.570 |
| C4 |
-0.092 |
0.670 |
-0.307 |
| C5 |
-1.520 |
0.431 |
0.189 |
| O6 |
-2.117 |
-0.711 |
-0.397 |
| N7 |
0.412 |
1.932 |
0.231 |
| H8 |
2.584 |
-1.123 |
-0.160 |
| H9 |
-0.124 |
0.751 |
-1.398 |
| H10 |
-1.518 |
0.371 |
1.286 |
| H11 |
-2.117 |
1.295 |
-0.097 |
| H12 |
-1.683 |
-1.493 |
-0.036 |
| H13 |
1.307 |
2.179 |
-0.173 |
| H14 |
0.524 |
1.889 |
1.239 |
Atom - Atom Distances (Å)
| |
C1 |
O2 |
O3 |
C4 |
C5 |
O6 |
N7 |
H8 |
H9 |
H10 |
H11 |
H12 |
H13 |
H14 |
| C1 | | 1.3523 | 1.2189 | 1.5308 | 2.5143 | 2.9468 | 2.5051 | 1.8914 | 2.1216 | 2.7894 | 3.4414 | 2.6575 | 2.7681 | 2.7273 |
O2 | 1.3523 | | 2.2612 | 2.3849 | 3.7153 | 4.2047 | 2.8733 | 0.9689 | 2.6491 | 4.0203 | 4.5020 | 3.9443 | 2.6333 | 3.1559 | O3 | 1.2189 | 2.2612 | | 2.4481 | 2.8071 | 2.8490 | 3.5044 | 2.3191 | 3.0823 | 2.8292 | 3.8786 | 2.1952 | 3.9091 | 3.5105 | C4 | 1.5308 | 2.3849 | 2.4481 | | 1.5305 | 2.4524 | 1.4614 | 3.2245 | 1.0944 | 2.1587 | 2.1297 | 2.6985 | 2.0624 | 2.0627 | C5 | 2.5143 | 3.7153 | 2.8071 | 1.5305 | | 1.4151 | 2.4469 | 4.4022 | 2.1381 | 1.0979 | 1.0891 | 1.9435 | 3.3439 | 2.7212 | O6 | 2.9468 | 4.2047 | 2.8490 | 2.4524 | 1.4151 | | 3.7111 | 4.7249 | 2.6668 | 2.0876 | 2.0281 | 0.9646 | 4.4861 | 4.0505 | N7 | 2.5051 | 2.8733 | 3.5044 | 1.4614 | 2.4469 | 3.7111 | | 3.7687 | 2.0818 | 2.6972 | 2.6285 | 4.0234 | 1.0131 | 1.0150 | H8 | 1.8914 | 0.9689 | 2.3191 | 3.2245 | 4.4022 | 4.7249 | 3.7687 | | 3.5180 | 4.5991 | 5.2870 | 4.2847 | 3.5404 | 3.9081 | H9 | 2.1216 | 2.6491 | 3.0823 | 1.0944 | 2.1381 | 2.6668 | 2.0818 | 3.5180 | | 3.0481 | 2.4414 | 3.0532 | 2.3634 | 2.9438 | H10 | 2.7894 | 4.0203 | 2.8292 | 2.1587 | 1.0979 | 2.0876 | 2.6972 | 4.5991 | 3.0481 | | 1.7681 | 2.2904 | 3.6582 | 2.5451 | H11 | 3.4414 | 4.5020 | 3.8786 | 2.1297 | 1.0891 | 2.0281 | 2.6285 | 5.2870 | 2.4414 | 1.7681 | | 2.8224 | 3.5373 | 3.0187 | H12 | 2.6575 | 3.9443 | 2.1952 | 2.6985 | 1.9435 | 0.9646 | 4.0234 | 4.2847 | 3.0532 | 2.2904 | 2.8224 | | 4.7373 | 4.2344 | H13 | 2.7681 | 2.6333 | 3.9091 | 2.0624 | 3.3439 | 4.4861 | 1.0131 | 3.5404 | 2.3634 | 3.6582 | 3.5373 | 4.7373 | | 1.6409 | H14 | 2.7273 | 3.1559 | 3.5105 | 2.0627 | 2.7212 | 4.0505 | 1.0150 | 3.9081 | 2.9438 | 2.5451 | 3.0187 | 4.2344 | 1.6409 | |
More geometry information
Calculated Bond Angles
| atom1 |
atom2 |
atom3 |
angle |
|
atom1 |
atom2 |
atom3 |
angle |
| C1 |
O2 |
H8 |
108.009 |
|
C1 |
C4 |
C5 |
110.433 |
| C1 |
C4 |
N7 |
113.669 |
|
C1 |
C4 |
H9 |
106.649 |
| O2 |
C1 |
O3 |
123.072 |
|
O2 |
C1 |
C4 |
111.478 |
| O3 |
C1 |
C4 |
125.449 |
|
C4 |
C5 |
O6 |
112.661 |
| C4 |
C5 |
H10 |
109.325 |
|
C4 |
C5 |
H11 |
107.580 |
| C4 |
N7 |
H13 |
111.625 |
|
C4 |
N7 |
H14 |
111.534 |
| C5 |
C4 |
N7 |
109.713 |
|
C5 |
C4 |
H9 |
107.928 |
| C5 |
O6 |
H12 |
108.008 |
|
O6 |
C5 |
H10 |
111.723 |
| O6 |
C5 |
H11 |
107.454 |
|
N7 |
C4 |
H9 |
108.228 |
| H10 |
C5 |
H11 |
107.885 |
|
H13 |
N7 |
H14 |
108.020 |
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability