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All results from a given calculation for HO2CCHNH2CH2OH (Serine)

using model chemistry: MP3=FULL/6-31+G**

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A
Energy calculated at MP3=FULL/6-31+G**
 hartrees
Energy at 0K-397.942190
Energy at 298.15K-397.952300
HF Energy-396.752412
Nuclear repulsion energy325.897952
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at MP3=FULL/6-31+G**
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A 3931 3662 55.20      
2 A 3888 3622 86.90      
3 A 3712 3458 7.94      
4 A 3612 3365 2.53      
5 A 3227 3006 16.10      
6 A 3162 2946 10.58      
7 A 3112 2899 38.27      
8 A 1880 1751 294.23      
9 A 1718 1601 42.03      
10 A 1561 1454 3.71      
11 A 1474 1373 21.61      
12 A 1458 1358 45.04      
13 A 1429 1331 39.65      
14 A 1419 1322 9.28      
15 A 1355 1262 16.93      
16 A 1280 1193 24.12      
17 A 1224 1141 50.47      
18 A 1203 1120 193.72      
19 A 1169 1089 10.07      
20 A 1134 1056 100.81      
21 A 1066 993 38.74      
22 A 1022 952 2.56      
23 A 898 836 174.37      
24 A 838 781 28.64      
25 A 766 713 23.07      
26 A 630 587 85.12      
27 A 602 561 44.04      
28 A 531 495 159.86      
29 A 511 476 70.86      
30 A 465 433 6.63      
31 A 303 282 7.93      
32 A 291 271 27.28      
33 A 277 258 19.86      
34 A 215 200 1.33      
35 A 168 156 4.69      
36 A 43 40 1.38      

Unscaled Zero Point Vibrational Energy (zpe) 25784.3 cm-1
Scaled (by 0.9316) Zero Point Vibrational Energy (zpe) 24020.7 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at MP3=FULL/6-31+G**
ABC
0.11737 0.07785 0.05272

See section I.F.4 to change rotational constant units
Geometric Data calculated at MP3=FULL/6-31+G**

Point Group is C1

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
C1 0.792 -0.531 0.020
O2 2.063 -0.339 -0.382
O3 0.420 -1.545 0.570
C4 -0.091 0.670 -0.307
C5 -1.516 0.430 0.187
O6 -2.106 -0.712 -0.395
N7 0.413 1.929 0.229
H8 2.570 -1.128 -0.158
H9 -0.121 0.748 -1.396
H10 -1.514 0.373 1.281
H11 -2.112 1.291 -0.101
H12 -1.668 -1.488 -0.034
H13 1.307 2.172 -0.173
H14 0.522 1.885 1.235

Atom - Atom Distances (Å)
  C1 O2 O3 C4 C5 O6 N7 H8 H9 H10 H11 H12 H13 H14
C11.34661.21191.52602.50562.93302.49781.88442.11482.77953.43072.63942.75842.7184
O21.34662.24942.37913.70414.18542.86980.96532.64104.00804.49043.91882.62983.1517
O31.21192.24942.43652.79242.83013.49022.30803.06862.81523.86112.17453.89253.4954
C41.52602.37912.43651.52702.44461.45843.21531.09152.15282.12462.68602.05662.0570
C52.50563.70412.79241.52701.41112.44274.38702.13361.09501.08621.93653.33642.7143
O62.93304.18542.83012.44461.41113.70224.70092.65962.08202.02420.96164.47374.0382
N72.49782.86983.49021.45842.44273.70223.76162.07832.69022.62524.00861.01021.0120
H81.88440.96532.30803.21534.38704.70093.76163.50634.58345.27104.25513.53363.9010
H92.11482.64103.06861.09152.13362.65962.07833.50633.04042.43643.04072.35842.9368
H102.77954.00802.81522.15281.09502.08202.69024.58343.04041.76342.28343.64772.5366
H113.43074.49043.86112.12461.08622.02422.62525.27102.43641.76342.81493.53173.0127
H122.63943.91882.17452.68601.93650.96164.00864.25513.04072.28342.81494.71814.2167
H132.75842.62983.89252.05663.33644.47371.01023.53362.35843.64773.53174.71811.6367
H142.71843.15173.49542.05702.71434.03821.01203.90102.93682.53663.01274.21671.6367

picture of Serine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
C1 O2 H8 108.058 C1 C4 C5 110.308
C1 C4 N7 113.618 C1 C4 H9 106.611
O2 C1 O3 122.997 O2 C1 C4 111.676
O3 C1 C4 125.327 C4 C5 O6 112.558
C4 C5 H10 109.269 C4 C5 H11 107.582
C4 N7 H13 111.542 C4 N7 H14 111.463
C5 C4 N7 109.790 C5 C4 H9 107.978
C5 O6 H12 107.903 O6 C5 H10 111.741
O6 C5 H11 107.593 N7 C4 H9 108.323
H10 C5 H11 107.892 H13 N7 H14 108.063
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability