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All results from a given calculation for C5H4N4 (purine)

using model chemistry: MP2=FULL/cc-pVDZ

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at MP2=FULL/cc-pVDZ
 hartrees
Energy at 0K-410.803509
Energy at 298.15K-410.811374
HF Energy-409.498795
Nuclear repulsion energy410.173787
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at MP2=FULL/cc-pVDZ
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3673 3490 115.66      
2 A' 3293 3130 0.32      
3 A' 3237 3076 15.80      
4 A' 3222 3062 10.64      
5 A' 1667 1584 39.33      
6 A' 1638 1556 29.11      
7 A' 1517 1442 23.71      
8 A' 1503 1428 26.55      
9 A' 1451 1379 53.18      
10 A' 1427 1356 17.16      
11 A' 1409 1339 66.86      
12 A' 1350 1283 29.04      
13 A' 1324 1259 5.20      
14 A' 1282 1218 23.11      
15 A' 1207 1147 7.31      
16 A' 1127 1071 7.13      
17 A' 1096 1042 6.76      
18 A' 940 894 0.52      
19 A' 914 869 12.34      
20 A' 803 763 11.58      
21 A' 654 622 0.86      
22 A' 565 537 4.16      
23 A' 439 417 13.34      
24 A" 980 931 0.27      
25 A" 925 879 14.34      
26 A" 870 827 9.40      
27 A" 802 763 3.91      
28 A" 666 633 1.51      
29 A" 628 596 30.57      
30 A" 524 498 84.02      
31 A" 422 401 3.64      
32 A" 246 234 0.92      
33 A" 233 221 4.12      

Unscaled Zero Point Vibrational Energy (zpe) 21015.8 cm-1
Scaled (by 0.9504) Zero Point Vibrational Energy (zpe) 19973.5 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at MP2=FULL/cc-pVDZ
ABC
0.13567 0.05814 0.04070

See section I.F.4 to change rotational constant units
Geometric Data calculated at MP2=FULL/cc-pVDZ

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.821 -1.271 0.000
C2 -2.109 0.062 0.000
N3 -1.278 1.109 0.000
C4 0.000 0.710 0.000
C5 0.460 -0.628 0.000
C6 -0.534 -1.622 0.000
N7 1.843 -0.697 0.000
C8 2.183 0.582 0.000
N9 1.128 1.480 0.000
H10 -3.175 0.299 0.000
H11 -0.301 -2.692 0.000
H12 3.215 0.926 0.000
H13 1.169 2.494 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.36322.44112.69052.36921.33353.70834.41154.03192.07322.08035.49404.8070
C21.36321.33712.20672.65992.30564.02424.32353.53371.09173.29385.39404.0817
N32.44111.33711.33942.45772.83113.60613.50112.43442.06213.92454.49732.8116
C42.69052.20671.33941.41502.39282.31842.18651.36503.20133.41493.22232.1324
C52.36922.65992.45771.41501.40581.38482.10582.21093.75102.19913.16343.2014
C61.33352.30562.83112.39281.40582.55113.49903.51893.26561.09444.53334.4544
N73.70834.02423.60612.31841.38482.55111.32342.29065.11552.92862.12493.2607
C84.41154.32353.50112.18652.10583.49901.32341.38505.36504.10951.08802.1636
N94.03193.53372.43441.36502.21093.51892.29061.38504.46134.40892.15971.0150
H102.07321.09172.06213.20133.75103.26565.11555.36504.46134.14756.42064.8664
H112.08033.29383.92453.41492.19911.09442.92864.10954.40894.14755.04475.3895
H125.49405.39404.49733.22233.16344.53332.12491.08802.15976.42065.04472.5780
H134.80704.08172.81162.13243.20144.45443.26072.16361.01504.86645.38952.5780

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 129.369 N1 C2 H10 114.789
N1 C6 C5 119.717 N1 C6 H11 117.586
C2 N1 C6 117.503 C2 N3 C4 111.069
N3 C2 H10 115.842 N3 C4 C5 126.300
N3 C4 N9 128.351 C4 C5 C6 116.042
C4 C5 N7 111.790 C4 N9 C8 105.322
C4 N9 H13 126.630 C5 C4 N9 105.349
C5 C6 H11 122.697 C5 N7 C8 102.051
C6 C5 N7 132.168 N7 C8 N9 115.489
N7 C8 H12 123.281 C8 N9 H13 128.049
N9 C8 H12 121.231
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability