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All results from a given calculation for C5H4N4 (purine)

using model chemistry: B3PW91/cc-pVTZ

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at B3PW91/cc-pVTZ
 hartrees
Energy at 0K-411.926907
Energy at 298.15K-411.934826
HF Energy-411.926907
Nuclear repulsion energy414.188529
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at B3PW91/cc-pVTZ
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3667 3526 87.83      
2 A' 3237 3113 0.41      
3 A' 3175 3054 13.47      
4 A' 3164 3043 14.45      
5 A' 1661 1598 64.89      
6 A' 1627 1565 80.21      
7 A' 1532 1474 25.47      
8 A' 1492 1434 2.16      
9 A' 1436 1381 55.90      
10 A' 1419 1364 26.75      
11 A' 1372 1320 56.44      
12 A' 1319 1268 18.51      
13 A' 1307 1257 13.51      
14 A' 1284 1234 35.93      
15 A' 1209 1162 6.94      
16 A' 1141 1098 6.55      
17 A' 1086 1045 14.94      
18 A' 947 911 1.42      
19 A' 912 877 12.40      
20 A' 811 780 14.31      
21 A' 660 635 0.43      
22 A' 569 547 3.79      
23 A' 446 429 12.20      
24 A" 1002 964 0.31      
25 A" 951 914 9.85      
26 A" 890 856 5.82      
27 A" 824 792 10.13      
28 A" 669 643 6.72      
29 A" 626 602 21.68      
30 A" 540 520 86.33      
31 A" 419 403 3.21      
32 A" 246 236 0.75      
33 A" 232 223 4.61      

Unscaled Zero Point Vibrational Energy (zpe) 20935.7 cm-1
Scaled (by 0.9616) Zero Point Vibrational Energy (zpe) 20131.8 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at B3PW91/cc-pVTZ
ABC
0.13923 0.05901 0.04144

See section I.F.4 to change rotational constant units
Geometric Data calculated at B3PW91/cc-pVTZ

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.808 -1.250 0.000
C2 -2.096 0.066 0.000
N3 -1.266 1.095 0.000
C4 0.000 0.700 0.000
C5 0.449 -0.624 0.000
C6 -0.537 -1.604 0.000
N7 1.827 -0.685 0.000
C8 2.176 0.569 0.000
N9 1.125 1.461 0.000
H10 -3.151 0.305 0.000
H11 -0.311 -2.665 0.000
H12 3.202 0.900 0.000
H13 1.168 2.465 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.34732.40722.65962.34261.31983.67874.38013.99442.05472.05965.45234.7608
C21.34731.32172.18962.63662.28453.99374.30153.50981.08223.26215.36314.0510
N32.40721.32171.32662.42832.79583.56873.48262.41902.04403.87914.47262.7938
C42.65962.18961.32661.39782.36552.29232.18021.35823.17613.37893.20832.1168
C52.34262.63662.42831.39781.39001.37912.09902.19193.71812.17773.14673.1715
C61.31982.28452.79582.36551.39002.53583.47573.48653.23701.08454.49984.4118
N73.67873.99373.56872.29231.37912.53581.30152.25815.07552.91362.09863.2181
C84.38014.30153.48262.18022.09903.47571.30151.37935.33424.07931.07802.1476
N93.99443.50982.41901.35822.19193.48652.25811.37934.42984.36862.15171.0047
H102.05471.08222.04403.17613.71813.23705.07555.33424.42984.10906.38124.8299
H112.05963.26213.87913.37892.17771.08452.91364.07934.36864.10905.00495.3387
H125.45235.36314.47263.20833.14674.49982.09861.07802.15176.38125.00492.5660
H134.76084.05102.79382.11683.17154.41183.21812.14761.00474.82995.33872.5660

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 128.812 N1 C2 H10 115.058
N1 C6 C5 119.626 N1 C6 H11 117.551
C2 N1 C6 117.858 C2 N3 C4 111.541
N3 C2 H10 116.131 N3 C4 C5 126.062
N3 C4 N9 128.577 C4 C5 C6 116.102
C4 C5 N7 111.276 C4 N9 C8 105.578
C4 N9 H13 126.586 C5 C4 N9 105.361
C5 C6 H11 122.822 C5 N7 C8 103.039
C6 C5 N7 132.622 N7 C8 N9 114.746
N7 C8 H12 123.490 C8 N9 H13 127.835
N9 C8 H12 121.765
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at B3PW91/cc-pVTZ Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 N -0.200      
2 C 0.053      
3 N -0.212      
4 C 0.133      
5 C 0.015      
6 C -0.057      
7 N -0.217      
8 C 0.030      
9 N -0.065      
10 H 0.110      
11 H 0.126      
12 H 0.125      
13 H 0.159      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  2.199 2.944 0.000 3.675
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -50.060 6.177 0.000
y 6.177 -46.949 0.000
z 0.000 0.000 -51.447
Traceless
 xyz
x -0.862 6.177 0.000
y 6.177 3.804 0.000
z 0.000 0.000 -2.942
Polar
3z2-r2-5.885
x2-y2-3.111
xy6.177
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 15.784 1.394 0.000
y 1.394 12.338 0.000
z 0.000 0.000 5.957


<r2> (average value of r2) Å2
<r2> 252.091
(<r2>)1/2 15.877