All results from a given calculation for HO2CCHNH2CH2OH (Serine)
using model chemistry: QCISD/cc-pVTZ
19 10 17 12 22
States and conformations
| State |
Conformation |
minimum conformation |
conformer description |
state description |
| 1 |
1 |
yes |
C1 |
1A |
Energy calculated at QCISD/cc-pVTZ
| | hartrees |
| Energy at 0K | -398.327623 |
| Energy at 298.15K | |
| HF Energy | -396.879529 |
| Nuclear repulsion energy | 326.587080 |
The energy at 298.15K was derived from the energy at 0K
and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at QCISD/cc-pVTZ
Geometric Data calculated at QCISD/cc-pVTZ
Point Group is C1
Cartesians (Å)
| Atom |
x (Å) |
y (Å) |
z (Å) |
| C1 |
0.790 |
-0.530 |
0.016 |
| O2 |
2.055 |
-0.330 |
-0.387 |
| O3 |
0.430 |
-1.537 |
0.575 |
| C4 |
-0.095 |
0.669 |
-0.309 |
| C5 |
-1.514 |
0.421 |
0.191 |
| O6 |
-2.102 |
-0.712 |
-0.397 |
| N7 |
0.406 |
1.925 |
0.230 |
| H8 |
2.550 |
-1.123 |
-0.152 |
| H9 |
-0.128 |
0.749 |
-1.397 |
| H10 |
-1.499 |
0.353 |
1.285 |
| H11 |
-2.115 |
1.286 |
-0.080 |
| H12 |
-1.635 |
-1.474 |
-0.049 |
| H13 |
1.308 |
2.149 |
-0.163 |
| H14 |
0.523 |
1.861 |
1.232 |
Atom - Atom Distances (Å)
| |
C1 |
O2 |
O3 |
C4 |
C5 |
O6 |
N7 |
H8 |
H9 |
H10 |
H11 |
H12 |
H13 |
H14 |
| C1 | | 1.3432 | 1.2071 | 1.5242 | 2.4979 | 2.9261 | 2.4936 | 1.8653 | 2.1152 | 2.7617 | 3.4269 | 2.6025 | 2.7343 | 2.6954 |
O2 | 1.3432 | | 2.2416 | 2.3721 | 3.6926 | 4.1743 | 2.8613 | 0.9634 | 2.6367 | 3.9869 | 4.4832 | 3.8779 | 2.5992 | 3.1262 | O3 | 1.2071 | 2.2416 | | 2.4332 | 2.7854 | 2.8342 | 3.4792 | 2.2796 | 3.0705 | 2.7918 | 3.8567 | 2.1575 | 3.8605 | 3.4619 | C4 | 1.5242 | 2.3721 | 2.4332 | | 1.5243 | 2.4374 | 1.4561 | 3.1983 | 1.0919 | 2.1474 | 2.1249 | 2.6511 | 2.0449 | 2.0438 | C5 | 2.4979 | 3.6926 | 2.7854 | 1.5243 | | 1.4059 | 2.4388 | 4.3607 | 2.1329 | 1.0962 | 1.0877 | 1.9142 | 3.3275 | 2.7021 | O6 | 2.9261 | 4.1743 | 2.8342 | 2.4374 | 1.4059 | | 3.6928 | 4.6763 | 2.6515 | 2.0800 | 2.0228 | 0.9589 | 4.4573 | 4.0200 | N7 | 2.4936 | 2.8613 | 3.4792 | 1.4561 | 2.4388 | 3.6928 | | 3.7456 | 2.0774 | 2.6860 | 2.6198 | 3.9744 | 1.0091 | 1.0109 | H8 | 1.8653 | 0.9634 | 2.2796 | 3.1983 | 4.3607 | 4.6763 | 3.7456 | | 3.4970 | 4.5427 | 5.2509 | 4.2010 | 3.4994 | 3.8634 | H9 | 2.1152 | 2.6367 | 3.0705 | 1.0919 | 2.1329 | 2.6515 | 2.0774 | 3.4970 | | 3.0381 | 2.4434 | 3.0051 | 2.3547 | 2.9278 | H10 | 2.7617 | 3.9869 | 2.7918 | 2.1474 | 1.0962 | 2.0800 | 2.6860 | 4.5427 | 3.0381 | | 1.7650 | 2.2658 | 3.6337 | 2.5226 | H11 | 3.4269 | 4.4832 | 3.8567 | 2.1249 | 1.0877 | 2.0228 | 2.6198 | 5.2509 | 2.4434 | 1.7650 | | 2.8013 | 3.5316 | 3.0021 | H12 | 2.6025 | 3.8779 | 2.1575 | 2.6511 | 1.9142 | 0.9589 | 3.9744 | 4.2010 | 3.0051 | 2.2658 | 2.8013 | | 4.6689 | 4.1730 | H13 | 2.7343 | 2.5992 | 3.8605 | 2.0449 | 3.3275 | 4.4573 | 1.0091 | 3.4994 | 2.3547 | 3.6337 | 3.5316 | 4.6689 | | 1.6270 | H14 | 2.6954 | 3.1262 | 3.4619 | 2.0438 | 2.7021 | 4.0200 | 1.0109 | 3.8634 | 2.9278 | 2.5226 | 3.0021 | 4.1730 | 1.6270 | |
More geometry information
Calculated Bond Angles
| atom1 |
atom2 |
atom3 |
angle |
|
atom1 |
atom2 |
atom3 |
angle |
| C1 |
O2 |
H8 |
106.782 |
|
C1 |
C4 |
C5 |
110.046 |
| C1 |
C4 |
N7 |
113.568 |
|
C1 |
C4 |
H9 |
106.740 |
| O2 |
C1 |
O3 |
122.947 |
|
O2 |
C1 |
C4 |
111.483 |
| O3 |
C1 |
C4 |
125.565 |
|
C4 |
C5 |
O6 |
112.507 |
| C4 |
C5 |
H10 |
108.968 |
|
C4 |
C5 |
H11 |
107.710 |
| C4 |
N7 |
H13 |
110.795 |
|
C4 |
N7 |
H14 |
110.584 |
| C5 |
C4 |
N7 |
109.809 |
|
C5 |
C4 |
H9 |
108.092 |
| C5 |
O6 |
H12 |
106.550 |
|
O6 |
C5 |
H10 |
111.874 |
| O6 |
C5 |
H11 |
107.744 |
|
N7 |
C4 |
H9 |
108.391 |
| H10 |
C5 |
H11 |
107.842 |
|
H13 |
N7 |
H14 |
107.310 |
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability