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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: HF/6-311G*

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at HF/6-311G*
 hartrees
Energy at 0K-593.896601
Energy at 298.15K-593.909850
Nuclear repulsion energy287.636052
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at HF/6-311G*
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3233 2924 76.70      
2 A' 3220 2912 51.52      
3 A' 3186 2881 40.08      
4 A' 3174 2871 37.99      
5 A' 3167 2864 53.76      
6 A' 3159 2857 10.13      
7 A' 2822 2552 19.14      
8 A' 1645 1488 6.69      
9 A' 1636 1480 0.06      
10 A' 1627 1472 3.84      
11 A' 1624 1468 0.30      
12 A' 1620 1465 0.10      
13 A' 1556 1408 0.03      
14 A' 1551 1402 4.29      
15 A' 1512 1367 14.87      
16 A' 1441 1303 18.41      
17 A' 1370 1239 23.25      
18 A' 1230 1113 3.77      
19 A' 1136 1027 0.09      
20 A' 1132 1024 0.15      
21 A' 1095 990 0.70      
22 A' 971 878 0.10      
23 A' 948 857 3.11      
24 A' 793 717 6.79      
25 A' 470 425 1.38      
26 A' 371 335 0.29      
27 A' 265 240 1.27      
28 A' 124 112 1.25      
29 A" 3271 2958 52.04      
30 A" 3233 2924 143.50      
31 A" 3219 2912 12.45      
32 A" 3194 2889 11.30      
33 A" 3175 2871 1.15      
34 A" 1633 1476 6.99      
35 A" 1456 1317 0.05      
36 A" 1455 1316 1.32      
37 A" 1405 1271 0.34      
38 A" 1334 1206 0.57      
39 A" 1189 1076 3.65      
40 A" 1048 948 0.42      
41 A" 912 824 1.70      
42 A" 816 738 0.31      
43 A" 784 709 3.04      
44 A" 264 239 0.10      
45 A" 211 191 21.32      
46 A" 152 137 1.96      
47 A" 109 99 3.16      
48 A" 68 62 2.18      

Unscaled Zero Point Vibrational Energy (zpe) 37501.8 cm-1
Scaled (by 0.9044) Zero Point Vibrational Energy (zpe) 33916.6 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at HF/6-311G*
ABC
0.48450 0.02664 0.02584

See section I.F.4 to change rotational constant units
Geometric Data calculated at HF/6-311G*

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -2.437 1.640 0.000
H2 -3.662 1.117 0.000
C3 -1.497 0.071 0.000
H4 -1.772 -0.499 0.878
H5 -1.772 -0.499 -0.878
C6 0.000 0.361 0.000
H7 0.249 0.961 -0.871
H8 0.249 0.961 0.871
C9 0.837 -0.919 0.000
H10 0.580 -1.520 0.870
H11 0.580 -1.520 -0.870
C12 2.342 -0.649 0.000
H13 2.600 -0.048 0.870
H14 2.600 -0.048 -0.870
C15 3.178 -1.926 0.000
H16 2.971 -2.534 0.876
H17 2.971 -2.534 -0.876
H18 4.240 -1.703 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.33231.82912.40592.40592.75222.90442.90444.15544.45474.45475.29855.38325.38326.65146.88686.88687.4667
H21.33232.40472.63782.63783.73974.01054.01054.93895.07065.07066.25856.42916.42917.48667.62187.62188.3902
C31.82912.40471.08201.08201.52542.14522.14522.53572.75742.75743.90604.19054.19055.08375.24535.24536.0050
H42.40592.63781.08201.75652.15613.04522.49282.78462.56383.10344.20874.39484.72965.22535.16035.45036.1932
H52.40592.63781.08201.75652.15612.49283.04522.78463.10342.56384.20874.72964.39485.22535.45035.16036.1932
C62.75223.73971.52542.15612.15611.08651.08651.52922.15202.15202.55022.77202.77203.91524.23924.23924.7153
H72.90444.01052.14523.04522.49281.08651.74192.15323.04872.50242.77993.09432.55834.20344.76114.42914.8761
H82.90444.01052.14522.49283.04521.08651.74192.15322.50243.04872.77992.55833.09434.20344.42914.76114.8761
C94.15544.93892.53572.78462.78461.52922.15322.15321.08861.08861.52852.14962.14962.54812.81542.81543.4915
H104.45475.07062.75742.56383.10342.15203.04872.50241.08861.74082.14932.49893.04502.76942.59653.12923.7660
H114.45475.07062.75743.10342.56382.15202.50243.04871.08861.74082.14933.04502.49892.76943.12922.59653.7660
C125.29856.25853.90604.20874.20872.55022.77992.77991.52852.14932.14931.08781.08781.52672.17162.17162.1710
H135.38326.42914.19054.39484.72962.77203.09432.55832.14962.49893.04501.08781.73922.14852.51283.05962.4863
H145.38326.42914.19054.72964.39482.77202.55833.09432.14963.04502.49891.08781.73922.14853.05962.51282.4863
C156.65147.48665.08375.22535.22533.91524.20344.20342.54812.76942.76941.52672.14852.14851.08601.08601.0852
H166.88687.62185.24535.16035.45034.23924.76114.42912.81542.59653.12922.17162.51283.05961.08601.75201.7517
H176.88687.62185.24535.45035.16034.23924.42914.76112.81543.12922.59652.17163.05962.51281.08601.75201.7517
H187.46678.39026.00506.19326.19324.71534.87614.87613.49153.76603.76602.17102.48632.48631.08521.75171.7517

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 108.748 S1 C3 H5 108.748
S1 C3 C6 109.932 H2 S1 C3 97.804
C3 C6 H7 109.285 C3 C6 H8 109.285
C3 C6 C9 112.228 H4 C3 H5 108.528
H4 C3 C6 110.419 H5 C3 C6 110.419
C6 C9 H10 109.432 C6 C9 H11 109.432
C6 C9 C12 113.030 H7 C6 H8 106.573
H7 C6 C9 109.653 H8 C6 C9 109.653
C9 C12 H13 109.341 C9 C12 H14 109.341
C9 C12 C15 113.028 H10 C9 H11 106.179
H10 C9 C12 109.268 H11 C9 C12 109.268
C12 C15 H16 111.324 C12 C15 H17 111.324
C12 C15 H18 111.318 H13 C12 H14 106.146
H13 C12 C15 109.376 H14 C12 C15 109.376
H16 C15 H17 107.537 H16 C15 H18 107.569
H17 C15 H18 107.569
Electronic energy levels

Electronic state

Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at HF/6-311G* Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S -0.113 -0.405   -0.388
2 H 0.132 0.215   0.226
3 C -0.543 -0.063   -0.290
4 H 0.240 0.054   0.128
5 H 0.240 0.054   0.128
6 C -0.423 0.228   0.227
7 H 0.223 -0.006   0.017
8 H 0.223 -0.006   0.017
9 C -0.396 -0.214   -0.212
10 H 0.203 0.034   0.039
11 H 0.203 0.034   0.039
12 C -0.402 0.298   0.292
13 H 0.203 -0.074   -0.069
14 H 0.203 -0.074   -0.069
15 C -0.613 -0.138   -0.198
16 H 0.204 0.021   0.037
17 H 0.204 0.021   0.037
18 H 0.211 0.021   0.040


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  0.373 -1.902 0.000 1.939
CHELPG        
AIM        
ESP 0.305 -1.926 0.000 1.950


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -46.111 4.159 0.000
y 4.159 -53.370 0.000
z 0.000 0.000 -49.422
Traceless
 xyz
x 5.285 4.159 0.000
y 4.159 -5.603 0.000
z 0.000 0.000 0.319
Polar
3z2-r20.637
x2-y27.258
xy4.159
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 12.411 -1.741 0.000
y -1.741 10.697 0.000
z 0.000 0.000 8.408


<r2> (average value of r2) Å2
<r2> 412.071
(<r2>)1/2 20.300