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All results from a given calculation for C5H4N4 (purine)

using model chemistry: CID/6-311G*

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at CID/6-311G*
 hartrees
Energy at 0K-410.571814
Energy at 298.15K-410.580005
HF Energy-409.552279
Nuclear repulsion energy416.177828
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at CID/6-311G*
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3863 3589 108.30      
2 A' 3381 3142 1.89      
3 A' 3338 3101 19.12      
4 A' 3322 3086 14.17      
5 A' 1788 1661 92.19      
6 A' 1752 1628 120.39      
7 A' 1659 1541 38.71      
8 A' 1593 1480 9.31      
9 A' 1527 1419 118.87      
10 A' 1522 1414 13.49      
11 A' 1458 1355 65.85      
12 A' 1396 1297 14.33      
13 A' 1373 1276 6.23      
14 A' 1289 1198 51.69      
15 A' 1281 1190 6.86      
16 A' 1204 1119 7.62      
17 A' 1154 1072 20.70      
18 A' 1001 930 0.86      
19 A' 968 899 15.29      
20 A' 852 792 18.11      
21 A' 696 646 0.19      
22 A' 601 558 3.54      
23 A' 467 434 14.10      
24 A" 1077 1001 0.32      
25 A" 1019 947 8.97      
26 A" 971 902 5.55      
27 A" 860 799 12.33      
28 A" 703 654 10.72      
29 A" 654 608 26.81      
30 A" 554 514 123.17      
31 A" 449 417 9.91      
32 A" 265 247 0.19      
33 A" 246 229 6.75      

Unscaled Zero Point Vibrational Energy (zpe) 22141.3 cm-1
Scaled (by 0.9291) Zero Point Vibrational Energy (zpe) 20571.5 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at CID/6-311G*
ABC
0.14090 0.05944 0.04181

See section I.F.4 to change rotational constant units
Geometric Data calculated at CID/6-311G*

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.802 -1.247 0.000
C2 -2.094 0.065 0.000
N3 -1.267 1.087 0.000
C4 0.000 0.696 0.000
C5 0.446 -0.618 0.000
C6 -0.536 -1.599 0.000
N7 1.825 -0.676 0.000
C8 2.174 0.567 0.000
N9 1.123 1.456 0.000
H10 -3.144 0.301 0.000
H11 -0.314 -2.655 0.000
H12 3.197 0.893 0.000
H13 1.166 2.450 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.34402.39392.65002.33441.31363.67124.37033.98242.04922.04865.43824.7406
C21.34401.31402.18662.63012.27893.98774.29723.50441.07713.25055.35554.0386
N32.39391.31401.32562.41672.78283.55873.48002.41832.03513.86084.46852.7887
C42.65002.18661.32561.38812.35682.28312.17801.35573.16913.36573.20352.1058
C52.33442.63012.41671.38811.38811.37962.09542.18153.70652.17383.13913.1513
C61.31362.27892.78282.35681.38812.53483.46953.47603.22681.07934.48904.3918
N73.67123.98773.55872.28311.37962.53481.29132.24425.06432.91352.08513.1946
C84.37034.29723.48002.17802.09543.46951.29131.37645.32524.07071.07402.1359
N93.98243.50442.41831.35572.18153.47602.24421.37644.42094.35442.14920.9952
H102.04921.07712.03513.16913.70653.22685.06435.32524.42094.09286.36944.8160
H112.04863.25053.86083.36572.17381.07932.91354.07074.35444.09284.99185.3148
H125.43825.35554.46853.20353.13914.48902.08511.07402.14926.36944.99182.5594
H134.74064.03862.78872.10583.15134.39183.19462.13590.99524.81605.31482.5594

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 128.481 N1 C2 H10 115.201
N1 C6 C5 119.524 N1 C6 H11 117.433
C2 N1 C6 118.067 C2 N3 C4 111.865
N3 C2 H10 116.317 N3 C4 C5 125.871
N3 C4 N9 128.813 C4 C5 C6 116.190
C4 C5 N7 111.154 C4 N9 C8 105.723
C4 N9 H13 126.523 C5 C4 N9 105.315
C5 C6 H11 123.043 C5 N7 C8 103.301
C6 C5 N7 132.656 N7 C8 N9 114.506
N7 C8 H12 123.390 C8 N9 H13 127.755
N9 C8 H12 122.104
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability