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All results from a given calculation for C5H4N4 (purine)

using model chemistry: MP2/6-311G*

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at MP2/6-311G*
 hartrees
Energy at 0K-410.876015
Energy at 298.15K-410.883789
HF Energy-409.546269
Nuclear repulsion energy411.676545
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at MP2/6-311G*
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3686 3503 100.67      
2 A' 3277 3114 0.60      
3 A' 3229 3068 15.26      
4 A' 3207 3048 10.33      
5 A' 1661 1579 43.11      
6 A' 1628 1547 33.34      
7 A' 1511 1436 23.56      
8 A' 1500 1425 19.89      
9 A' 1450 1378 68.96      
10 A' 1439 1367 7.46      
11 A' 1394 1324 71.00      
12 A' 1348 1281 34.50      
13 A' 1329 1263 9.09      
14 A' 1286 1222 27.72      
15 A' 1211 1151 5.49      
16 A' 1127 1071 10.84      
17 A' 1112 1056 6.60      
18 A' 945 898 0.40      
19 A' 917 872 12.70      
20 A' 803 763 11.19      
21 A' 657 625 0.62      
22 A' 567 539 3.91      
23 A' 439 417 14.69      
24 A" 956 908 0.16      
25 A" 904 859 19.01      
26 A" 847 805 13.89      
27 A" 766 728 3.61      
28 A" 663 630 1.11      
29 A" 617 586 41.29      
30 A" 509 484 99.50      
31 A" 412 392 3.16      
32 A" 239 227 0.42      
33 A" 226 215 5.14      

Unscaled Zero Point Vibrational Energy (zpe) 20931.5 cm-1
Scaled (by 0.9503) Zero Point Vibrational Energy (zpe) 19891.2 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at MP2/6-311G*
ABC
0.13677 0.05853 0.04099

See section I.F.4 to change rotational constant units
Geometric Data calculated at MP2/6-311G*

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.828 -1.262 0.000
C2 -2.125 0.061 0.000
N3 -1.276 1.096 0.000
C4 0.000 0.701 0.000
C5 0.456 -0.632 0.000
C6 -0.539 -1.618 0.000
N7 1.840 -0.679 0.000
C8 2.201 0.589 0.000
N9 1.140 1.468 0.000
H10 -3.184 0.304 0.000
H11 -0.302 -2.680 0.000
H12 3.226 0.941 0.000
H13 1.177 2.476 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.35602.42222.68272.36891.33693.71424.43384.03252.07212.08285.51324.7963
C21.35601.33852.21892.67172.30874.03324.35743.55451.08733.29145.42224.0906
N32.42221.33851.33612.44702.81213.58683.51392.44442.06583.90004.50482.8148
C42.68272.21891.33611.40922.38042.30042.20361.37363.20893.39473.23472.1296
C52.36892.67172.44701.40921.40001.38542.13012.20883.75842.18353.18583.1908
C61.33692.30872.81212.38041.40002.55763.51793.51253.26951.08874.55204.4385
N73.71424.03323.58682.30041.38542.55761.31872.25865.11982.93142.13213.2240
C84.43384.35743.51392.20362.13013.51791.31871.37785.39254.11741.08382.1464
N94.03253.55452.44441.37362.20883.51252.25861.37784.47774.39152.15161.0085
H102.07211.08732.06583.20893.75843.26955.11985.39254.47774.14876.44154.8721
H112.08283.29143.90003.39472.18351.08872.93144.11744.39154.14875.05575.3639
H125.51325.42224.50483.23473.18584.55202.13211.08382.15166.44155.05572.5596
H134.79634.09062.81482.12963.19084.43853.22402.14641.00854.87215.36392.5596

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 128.043 N1 C2 H10 115.568
N1 C6 C5 119.875 N1 C6 H11 117.970
C2 N1 C6 118.038 C2 N3 C4 112.123
N3 C2 H10 116.389 N3 C4 C5 126.065
N3 C4 N9 128.865 C4 C5 C6 115.857
C4 C5 N7 110.807 C4 N9 C8 106.435
C4 N9 H13 126.071 C5 C4 N9 105.070
C5 C6 H11 122.155 C5 N7 C8 103.927
C6 C5 N7 133.336 N7 C8 N9 113.761
N7 C8 H12 124.828 C8 N9 H13 127.495
N9 C8 H12 121.411
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability