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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: B1B95/3-21G*

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at B1B95/3-21G*
 hartrees
Energy at 0K-592.928823
Energy at 298.15K-592.941798
Nuclear repulsion energy286.949443
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at B1B95/3-21G*
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A 3147 3005 39.86      
2 A 3140 2999 30.10      
3 A 3138 2996 39.61      
4 A 3117 2976 9.00      
5 A 3100 2960 2.01      
6 A 3085 2946 33.55      
7 A 3079 2940 0.80      
8 A 3068 2930 23.97      
9 A 3062 2924 30.02      
10 A 3060 2922 6.27      
11 A 3048 2910 4.11      
12 A 2709 2587 16.44      
13 A 1565 1494 9.60      
14 A 1560 1490 10.51      
15 A 1553 1483 5.99      
16 A 1542 1473 1.41      
17 A 1538 1469 0.78      
18 A 1531 1462 3.37      
19 A 1456 1390 6.58      
20 A 1399 1336 1.54      
21 A 1391 1328 7.13      
22 A 1369 1307 0.96      
23 A 1366 1304 0.00      
24 A 1343 1282 14.91      
25 A 1325 1266 0.47      
26 A 1287 1229 8.67      
27 A 1252 1195 0.05      
28 A 1152 1100 10.52      
29 A 1124 1074 2.47      
30 A 1071 1023 0.79      
31 A 1064 1016 2.25      
32 A 1026 980 0.57      
33 A 996 951 0.00      
34 A 919 878 1.84      
35 A 873 834 1.30      
36 A 867 827 3.06      
37 A 780 745 0.22      
38 A 750 717 8.44      
39 A 748 714 3.31      
40 A 442 422 1.48      
41 A 346 331 0.37      
42 A 249 238 18.47      
43 A 248 236 1.42      
44 A 242 231 5.33      
45 A 148 141 0.64      
46 A 114 109 1.02      
47 A 111 106 1.22      
48 A 66 63 1.04      

Unscaled Zero Point Vibrational Energy (zpe) 35782.2 cm-1
Scaled (by 0.9549) Zero Point Vibrational Energy (zpe) 34168.4 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at B1B95/3-21G*
ABC
0.47243 0.02672 0.02591

See section I.F.4 to change rotational constant units
Geometric Data calculated at B1B95/3-21G*

Point Group is C1

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -2.921 -0.260 -0.000
H2 -3.735 0.810 -0.000
C3 -1.344 0.671 0.000
H4 -1.288 1.302 -0.891
H5 -1.288 1.302 0.891
C6 -0.177 -0.326 0.000
H7 -0.248 -0.969 0.885
H8 -0.248 -0.969 -0.885
C9 1.176 0.402 0.000
H10 1.242 1.049 -0.884
H11 1.242 1.049 0.884
C12 2.360 -0.577 0.000
H13 2.291 -1.223 -0.883
H14 2.291 -1.223 0.883
C15 3.707 0.160 -0.000
H16 3.795 0.797 -0.886
H17 3.795 0.797 0.886
H18 4.544 -0.544 -0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.34451.83122.42872.42872.74512.90392.90394.15014.45244.45245.29075.37345.37346.64166.85636.85647.4703
H21.34452.39542.65002.65013.73564.01394.01394.92825.06085.06086.25136.42126.42127.47097.58267.58268.3893
C31.83122.39541.09321.09321.53522.16202.16202.53432.75892.75893.90874.19314.19315.07715.21665.21666.0121
H42.42872.65001.09321.78132.16373.06522.49832.77092.54313.10124.19974.38104.72645.20155.10885.40906.1823
H52.42872.65011.09321.78132.16372.49833.06522.77093.10122.54314.19974.72644.38105.20155.40915.10886.1823
C62.74513.73561.53522.16372.16371.09611.09611.53622.16452.16452.54932.77022.77033.91434.22174.22174.7257
H72.90394.01392.16203.06522.49831.09611.77032.16553.06932.50802.78183.10412.55154.20724.75404.41174.8912
H82.90394.01392.16202.49833.06521.09611.77032.16552.50803.06932.78182.55153.10424.20724.41164.75404.8912
C94.15014.92822.53432.77092.77091.53622.16552.16551.09761.09761.53632.15982.15982.54282.79322.79323.4983
H104.45245.06082.75892.54313.10122.16453.06932.50801.09761.76842.16222.50293.06382.76582.56583.11743.7714
H114.45245.06082.75893.10122.54312.16452.50803.06931.09761.76842.16223.06382.50292.76583.11742.56583.7714
C125.29076.25133.90874.19974.19972.54932.78182.78181.53632.16222.16221.09661.09661.53552.17512.17512.1839
H135.37346.42124.19314.38104.72642.77023.10412.55152.15982.50293.06381.09661.76562.16792.51873.07792.5132
H145.37346.42124.19314.72644.38102.77032.55153.10422.15983.06382.50291.09661.76562.16793.07792.51872.5132
C156.64167.47095.07715.20155.20153.91434.20724.20722.54282.76582.76581.53552.16792.16791.09481.09481.0938
H166.85637.58265.21665.10885.40914.22174.75404.41162.79322.56583.11742.17512.51873.07791.09481.77271.7733
H176.85647.58265.21665.40905.10884.22174.41174.75402.79323.11742.56582.17513.07792.51871.09481.77271.7733
H187.47038.38936.01216.18236.18234.72574.89124.89123.49833.77143.77142.18392.51322.51321.09381.77331.7733

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 109.714 S1 C3 H5 109.714
S1 C3 C6 108.942 H2 S1 C3 96.728
C3 C6 H7 109.363 C3 C6 H8 109.363
C3 C6 C9 111.202 H4 C3 H5 109.125
H4 C3 C6 109.667 H5 C3 C6 109.668
C6 C9 H10 109.405 C6 C9 H11 109.405
C6 C9 C12 112.139 H7 C6 H8 107.711
H7 C6 C9 109.566 H8 C6 C9 109.566
C9 C12 H13 109.091 C9 C12 H14 109.092
C9 C12 C15 111.750 H10 C9 H11 107.333
H10 C9 C12 109.220 H11 C9 C12 109.220
C12 C15 H16 110.458 C12 C15 H17 110.458
C12 C15 H18 111.217 H13 C12 H14 107.234
H13 C12 C15 109.781 H14 C12 C15 109.781
H16 C15 H17 108.120 H16 C15 H18 108.244
H17 C15 H18 108.244
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at B1B95/3-21G* Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S -0.071      
2 H 0.129      
3 C -0.579      
4 H 0.237      
5 H 0.237      
6 C -0.431      
7 H 0.226      
8 H 0.226      
9 C -0.396      
10 H 0.206      
11 H 0.206      
12 C -0.423      
13 H 0.209      
14 H 0.209      
15 C -0.600      
16 H 0.204      
17 H 0.204      
18 H 0.207      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  1.165 1.411 0.000 1.829
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -48.979 -4.783 0.000
y -4.783 -46.706 -0.000
z 0.000 -0.000 -48.243
Traceless
 xyz
x -1.504 -4.783 0.000
y -4.783 1.905 -0.000
z 0.000 -0.000 -0.400
Polar
3z2-r2-0.801
x2-y2-2.273
xy-4.783
xz0.000
yz-0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 12.859 0.017 0.000
y 0.017 8.820 0.000
z 0.000 0.000 7.869


<r2> (average value of r2) Å2
<r2> 410.195
(<r2>)1/2 20.253