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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: wB97X-D/3-21G*

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at wB97X-D/3-21G*
 hartrees
Energy at 0K-592.960289
Energy at 298.15K-592.973302
HF Energy-592.960289
Nuclear repulsion energy286.323723
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at wB97X-D/3-21G*
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3151 2987 28.27      
2 A' 3100 2938 28.90      
3 A' 3082 2921 20.37      
4 A' 3075 2914 20.02      
5 A' 3074 2913 18.13      
6 A' 3063 2903 4.54      
7 A' 2849 2700 19.59      
8 A' 1572 1490 11.79      
9 A' 1563 1481 7.76      
10 A' 1553 1472 1.23      
11 A' 1550 1469 0.57      
12 A' 1542 1461 4.07      
13 A' 1475 1398 9.31      
14 A' 1426 1351 0.21      
15 A' 1417 1343 7.46      
16 A' 1367 1296 14.97      
17 A' 1311 1243 7.90      
18 A' 1166 1105 11.75      
19 A' 1079 1023 1.93      
20 A' 1072 1016 1.07      
21 A' 1033 979 0.33      
22 A' 929 880 2.11      
23 A' 899 852 1.27      
24 A' 752 713 2.82      
25 A' 458 434 1.67      
26 A' 361 342 0.49      
27 A' 259 245 1.38      
28 A' 125 118 1.09      
29 A" 3161 2996 34.07      
30 A" 3150 2986 41.26      
31 A" 3131 2968 7.87      
32 A" 3115 2952 2.19      
33 A" 3096 2934 0.84      
34 A" 1571 1489 11.35      
35 A" 1387 1315 0.78      
36 A" 1385 1312 0.20      
37 A" 1340 1270 0.41      
38 A" 1265 1199 0.02      
39 A" 1140 1081 2.09      
40 A" 1012 959 0.00      
41 A" 880 834 3.15      
42 A" 790 749 0.15      
43 A" 757 718 9.07      
44 A" 243 231 0.10      
45 A" 207 196 23.33      
46 A" 152 144 1.30      
47 A" 100 95 1.72      
48 A" 68 64 1.96      

Unscaled Zero Point Vibrational Energy (zpe) 36124.2 cm-1
Scaled (by 0.9478) Zero Point Vibrational Energy (zpe) 34238.5 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at wB97X-D/3-21G*
ABC
0.47343 0.02655 0.02575

See section I.F.4 to change rotational constant units
Geometric Data calculated at wB97X-D/3-21G*

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -2.472 1.604 0.000
H2 -3.693 1.042 0.000
C3 -1.502 0.045 0.000
H4 -1.754 -0.539 0.889
H5 -1.754 -0.539 -0.889
C6 0.000 0.370 0.000
H7 0.244 0.972 -0.884
H8 0.244 0.972 0.884
C9 0.856 -0.908 0.000
H10 0.608 -1.513 0.883
H11 0.608 -1.513 -0.883
C12 2.363 -0.606 0.000
H13 2.609 -0.000 0.882
H14 2.609 -0.000 -0.882
C15 3.210 -1.887 0.000
H16 2.993 -2.494 0.887
H17 2.993 -2.494 -0.887
H18 4.280 -1.656 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.34471.83612.42932.42932.76302.92512.92514.16944.47034.47035.31635.40065.40066.66946.88796.88797.4982
H21.34472.40692.65522.65523.75374.03564.03564.94905.08005.08006.27646.44826.44827.49927.61487.61488.4175
C31.83612.40691.09381.09381.53672.16562.16562.54322.76792.76793.91984.20484.20485.09345.23805.23806.0276
H42.42932.65521.09381.77902.16663.06962.50532.78172.55503.10984.21284.39614.73975.22055.13345.43206.2010
H52.42932.65521.09381.77902.16662.50533.06962.78173.10982.55504.21284.73974.39615.22055.43205.13346.2010
C62.76303.75371.53672.16662.16661.09751.09751.53772.16652.16652.55672.77872.77873.92464.23594.23594.7356
H72.92514.03562.16563.06962.50531.09751.76852.16593.07122.51162.78643.10792.55724.21444.76524.42394.8973
H82.92514.03562.16562.50533.06961.09751.76852.16592.51163.07122.78642.55723.10794.21444.42394.76524.8973
C94.16944.94902.54322.78172.78171.53772.16592.16591.09881.09881.53752.16232.16232.55032.80512.80513.5054
H104.47035.08002.76792.55503.10982.16653.07122.51161.09881.76672.16402.50803.06712.77342.57843.12753.7796
H114.47035.08002.76793.10982.55502.16652.51163.07121.09881.76672.16403.06712.50802.77343.12752.57843.7796
C125.31636.27643.91984.21284.21282.55672.78642.78641.53752.16402.16401.09781.09781.53652.17902.17902.1860
H135.40066.44824.20484.39614.73972.77873.10792.55722.16232.50803.06711.09781.76422.16852.52313.08142.5127
H145.40066.44824.20484.73974.39612.77872.55723.10792.16233.06712.50801.09781.76422.16853.08142.52312.5127
C156.66947.49925.09345.22055.22053.92464.21444.21442.55032.77342.77341.53652.16852.16851.09601.09601.0949
H166.88797.61485.23805.13345.43204.23594.76524.42392.80512.57843.12752.17902.52313.08141.09601.77351.7740
H176.88797.61485.23805.43205.13344.23594.42394.76522.80513.12752.57842.17903.08142.52311.09601.77351.7740
H187.49828.41756.02766.20106.20104.73564.89734.89733.50543.77963.77962.18602.51272.51271.09491.77401.7740

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 109.399 S1 C3 H5 109.399
S1 C3 C6 109.691 H2 S1 C3 97.141
C3 C6 H7 109.458 C3 C6 H8 109.458
C3 C6 C9 111.624 H4 C3 H5 108.821
H4 C3 C6 109.756 H5 C3 C6 109.756
C6 C9 H10 109.392 C6 C9 H11 109.392
C6 C9 C12 112.483 H7 C6 H8 107.361
H7 C6 C9 109.421 H8 C6 C9 109.421
C9 C12 H13 109.135 C9 C12 H14 109.135
C9 C12 C15 112.124 H10 C9 H11 107.009
H10 C9 C12 109.207 H11 C9 C12 109.207
C12 C15 H16 110.611 C12 C15 H17 110.611
C12 C15 H18 111.237 H13 C12 H14 106.939
H13 C12 C15 109.683 H14 C12 C15 109.683
H16 C15 H17 108.007 H16 C15 H18 108.130
H17 C15 H18 108.130
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at wB97X-D/3-21G* Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S -0.075      
2 H 0.129      
3 C -0.577      
4 H 0.238      
5 H 0.238      
6 C -0.429      
7 H 0.225      
8 H 0.225      
9 C -0.394      
10 H 0.205      
11 H 0.205      
12 C -0.421      
13 H 0.209      
14 H 0.209      
15 C -0.608      
16 H 0.205      
17 H 0.205      
18 H 0.209      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  0.377 -1.841 0.000 1.880
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -44.629 3.849 0.000
y 3.849 -51.343 0.000
z 0.000 0.000 -48.239
Traceless
 xyz
x 5.163 3.849 0.000
y 3.849 -4.910 0.000
z 0.000 0.000 -0.253
Polar
3z2-r2-0.507
x2-y26.715
xy3.849
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 11.761 -1.565 0.000
y -1.565 9.584 0.000
z 0.000 0.000 7.873


<r2> (average value of r2) Å2
<r2> 412.435
(<r2>)1/2 20.309