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All results from a given calculation for C5H4N4 (purine)

using model chemistry: MP2=FULL/3-21G*

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at MP2=FULL/3-21G*
 hartrees
Energy at 0K-408.027248
Energy at 298.15K-408.035106
HF Energy-407.139764
Nuclear repulsion energy405.427554
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at MP2=FULL/3-21G*
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
(Å4/u)
Dep P Dep U
1 A' 3592 3406 114.42      
2 A' 3298 3126 1.04      
3 A' 3246 3077 16.88      
4 A' 3221 3054 8.98      
5 A' 1571 1490 45.22      
6 A' 1528 1448 14.62      
7 A' 1460 1384 15.58      
8 A' 1442 1367 33.56      
9 A' 1398 1325 7.69      
10 A' 1390 1318 26.70      
11 A' 1320 1251 3.14      
12 A' 1259 1193 74.18      
13 A' 1236 1172 41.67      
14 A' 1170 1109 40.76      
15 A' 1158 1098 16.91      
16 A' 1060 1004 9.79      
17 A' 1059 1004 6.49      
18 A' 930 882 0.06      
19 A' 888 842 11.73      
20 A' 772 732 8.72      
21 A' 660 625 0.95      
22 A' 567 537 2.47      
23 A' 430 408 14.34      
24 A" 994 942 0.58      
25 A" 946 896 24.38      
26 A" 868 823 7.67      
27 A" 827 784 11.22      
28 A" 665 631 12.84      
29 A" 631 598 52.29      
30 A" 617 585 124.84      
31 A" 442 419 1.80      
32 A" 258 245 1.61      
33 A" 232 220 4.18      

Unscaled Zero Point Vibrational Energy (zpe) 20566.6 cm-1
Scaled (by 0.948) Zero Point Vibrational Energy (zpe) 19497.2 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at MP2=FULL/3-21G*
ABC
0.13360 0.05647 0.03969

See section I.F.4 to change rotational constant units
Geometric Data calculated at MP2=FULL/3-21G*

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.837 -1.294 0.000
C2 -2.156 0.052 0.000
N3 -1.302 1.101 0.000
C4 0.000 0.713 0.000
C5 0.463 -0.634 0.000
C6 -0.530 -1.633 0.000
N7 1.873 -0.691 0.000
C8 2.222 0.603 0.000
N9 1.137 1.503 0.000
H10 -3.212 0.283 0.000
H11 -0.279 -2.688 0.000
H12 3.242 0.949 0.000
H13 1.162 2.517 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.38292.45382.72092.39331.35043.75844.48054.08272.09242.09005.55204.8495
C21.38291.35282.25542.70772.34134.09674.41273.59861.08123.32045.47204.1338
N32.45381.35281.35852.47492.84043.64563.55892.47172.07793.92404.54642.8421
C42.72092.25541.35851.42442.40492.34082.22471.38443.24103.41233.25032.1457
C52.39332.70772.47491.42441.40861.41052.15002.24083.78832.18423.19743.2273
C61.35042.34132.84042.40491.40862.58033.54563.55143.29631.08434.57044.4812
N73.75844.09673.64562.34081.41052.58031.34082.31495.17752.93562.13643.2861
C84.48054.41273.55892.22472.15003.54561.34081.41015.44374.13371.07682.1877
N94.08273.59862.47171.38442.24083.55142.31491.41014.51694.42402.17711.0138
H102.09241.08122.07793.24103.78833.29635.17755.44374.51694.17456.48834.9117
H112.09003.32043.92403.41232.18421.08432.93564.13374.42404.17455.06195.4006
H125.55205.47204.54643.25033.19744.57042.13641.07682.17716.48835.06192.6049
H134.84954.13382.84212.14573.22734.48123.28612.18771.01384.91175.40062.6049

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 127.512 N1 C2 H10 115.700
N1 C6 C5 120.314 N1 C6 H11 117.866
C2 N1 C6 117.863 C2 N3 C4 112.572
N3 C2 H10 116.788 N3 C4 C5 125.561
N3 C4 N9 128.611 C4 C5 C6 116.179
C4 C5 N7 111.323 C4 N9 C8 105.512
C4 N9 H13 126.247 C5 C4 N9 105.828
C5 C6 H11 121.820 C5 N7 C8 102.761
C6 C5 N7 132.498 N7 C8 N9 114.576
N7 C8 H12 123.811 C8 N9 H13 128.241
N9 C8 H12 121.613
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability