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All results from a given calculation for C5H4N4 (purine)

using model chemistry: CCD/3-21G*

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at CCD/3-21G*
 hartrees
Energy at 0K-408.024460
Energy at 298.15K-408.032407
HF Energy-407.143693
Nuclear repulsion energy406.766171
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at CCD/3-21G*
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3616 3459 106.46      
2 A' 3264 3122 1.88      
3 A' 3214 3074 18.53      
4 A' 3191 3052 9.90      
5 A' 1608 1538 55.27      
6 A' 1565 1497 24.18      
7 A' 1480 1416 37.86      
8 A' 1470 1406 1.43      
9 A' 1420 1358 22.28      
10 A' 1410 1349 25.90      
11 A' 1352 1293 13.09      
12 A' 1284 1229 65.90      
13 A' 1275 1219 44.39      
14 A' 1184 1133 4.43      
15 A' 1107 1059 37.34      
16 A' 1081 1034 32.28      
17 A' 1065 1019 6.51      
18 A' 940 899 1.94      
19 A' 904 865 14.61      
20 A' 789 755 9.83      
21 A' 669 640 0.71      
22 A' 574 549 2.26      
23 A' 435 416 13.97      
24 A" 1009 965 0.65      
25 A" 958 916 18.54      
26 A" 890 851 3.92      
27 A" 847 810 17.28      
28 A" 672 643 28.05      
29 A" 634 606 1.64      
30 A" 619 592 174.44      
31 A" 454 434 2.42      
32 A" 266 254 1.58      
33 A" 238 228 4.05      

Unscaled Zero Point Vibrational Energy (zpe) 20741.3 cm-1
Scaled (by 0.9565) Zero Point Vibrational Energy (zpe) 19839.1 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at CCD/3-21G*
ABC
0.13505 0.05667 0.03992

See section I.F.4 to change rotational constant units
Geometric Data calculated at CCD/3-21G*

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.831 -1.290 0.000
C2 -2.152 0.051 0.000
N3 -1.299 1.092 0.000
C4 0.000 0.710 0.000
C5 0.460 -0.629 0.000
C6 -0.532 -1.629 0.000
N7 1.869 -0.682 0.000
C8 2.220 0.600 0.000
N9 1.135 1.498 0.000
H10 -3.211 0.283 0.000
H11 -0.282 -2.686 0.000
H12 3.243 0.944 0.000
H13 1.161 2.510 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.37862.44072.71182.38521.34333.75034.47044.07062.09202.08595.54414.8365
C21.37861.34592.25092.69942.33424.08784.40643.59151.08363.31525.46844.1261
N32.44071.34591.35452.46122.82753.63173.55342.46802.07533.91324.54462.8399
C42.71182.25091.35451.41562.39892.33082.22241.38143.23893.40843.25122.1416
C52.38522.69942.46121.41561.40891.41002.14622.23083.78242.18773.19613.2155
C61.34332.33422.82752.39891.40892.58093.54133.54323.29141.08644.56804.4715
N73.75034.08783.63172.33081.41002.58091.32952.30025.17082.94052.12843.2692
C84.47044.40643.55342.22242.14623.54131.32951.40785.43964.13081.07912.1829
N94.07063.59152.46801.38142.23083.54322.30021.40784.51214.41772.17931.0122
H102.09201.08362.07533.23893.78243.29145.17085.43964.51214.17076.48714.9062
H112.08593.31523.91323.40842.18771.08642.94054.13084.41774.17075.06015.3928
H125.54415.46844.54463.25123.19614.56802.12841.07912.17936.48715.06012.6045
H134.83654.12612.83992.14163.21554.47153.26922.18291.01224.90625.39282.6045

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 127.227 N1 C2 H10 115.836
N1 C6 C5 120.123 N1 C6 H11 117.905
C2 N1 C6 118.087 C2 N3 C4 112.934
N3 C2 H10 116.938 N3 C4 C5 125.355
N3 C4 N9 128.861 C4 C5 C6 116.274
C4 C5 N7 111.148 C4 N9 C8 105.647
C4 N9 H13 126.254 C5 C4 N9 105.784
C5 C6 H11 121.972 C5 N7 C8 103.108
C6 C5 N7 132.578 N7 C8 N9 114.313
N7 C8 H12 123.845 C8 N9 H13 128.100
N9 C8 H12 121.842
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability