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All results from a given calculation for C5H4N4 (purine)

using model chemistry: mPW1PW91/6-31G

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at mPW1PW91/6-31G
 hartrees
Energy at 0K-411.699683
Energy at 298.15K-411.707713
HF Energy-411.699683
Nuclear repulsion energy410.519871
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at mPW1PW91/6-31G
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3732 3533 96.03      
2 A' 3342 3163 0.15      
3 A' 3288 3113 12.12      
4 A' 3264 3089 8.17      
5 A' 1676 1587 61.35      
6 A' 1632 1545 48.94      
7 A' 1526 1445 40.39      
8 A' 1495 1415 3.09      
9 A' 1455 1377 20.30      
10 A' 1435 1358 27.35      
11 A' 1383 1309 59.28      
12 A' 1334 1263 31.33      
13 A' 1316 1245 3.73      
14 A' 1291 1222 58.74      
15 A' 1215 1150 3.35      
16 A' 1137 1076 7.40      
17 A' 1114 1054 16.18      
18 A' 962 911 0.38      
19 A' 913 864 11.86      
20 A' 812 769 11.89      
21 A' 670 634 0.33      
22 A' 575 544 3.61      
23 A' 446 423 15.34      
24 A" 1008 954 0.75      
25 A" 958 907 19.10      
26 A" 904 855 2.82      
27 A" 825 781 20.12      
28 A" 683 647 171.55      
29 A" 674 638 13.04      
30 A" 633 599 17.33      
31 A" 439 416 0.61      
32 A" 258 244 2.29      
33 A" 236 224 3.55      

Unscaled Zero Point Vibrational Energy (zpe) 21314.9 cm-1
Scaled (by 0.9466) Zero Point Vibrational Energy (zpe) 20176.7 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at mPW1PW91/6-31G
ABC
0.13709 0.05786 0.04069

See section I.F.4 to change rotational constant units
Geometric Data calculated at mPW1PW91/6-31G

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.816 -1.269 0.000
C2 -2.128 0.056 0.000
N3 -1.283 1.091 0.000
C4 0.000 0.705 0.000
C5 0.455 -0.627 0.000
C6 -0.527 -1.619 0.000
N7 1.846 -0.680 0.000
C8 2.196 0.590 0.000
N9 1.126 1.478 0.000
H10 -3.180 0.287 0.000
H11 -0.291 -2.674 0.000
H12 3.216 0.927 0.000
H13 1.158 2.483 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.36122.41952.68222.35971.33523.70894.42204.02532.06982.07335.49004.7873
C21.36121.33612.22442.67152.31674.04124.35683.55111.07783.29045.41424.0844
N32.41951.33611.33952.44392.81353.59513.51492.43992.06083.89374.50182.8094
C42.68222.22441.33951.40812.38342.30772.19941.36613.20763.39213.22382.1214
C52.35972.67152.44391.40811.39591.39202.12482.21003.74872.17893.16833.1887
C61.33522.31672.81352.38341.39592.55253.50713.51113.26701.08134.52704.4346
N73.70894.04123.59512.30771.39202.55251.31732.27475.11852.92372.11123.2366
C84.42204.35683.51492.19942.12483.50711.31731.39055.38524.10451.07382.1590
N94.02533.55112.43991.36612.21003.51112.27471.39054.46824.38792.16141.0052
H102.06981.07782.06083.20763.74873.26705.11855.38524.46824.13736.42834.8619
H112.07333.29043.89373.39212.17891.08132.92374.10454.38794.13735.02705.3570
H125.49005.41424.50183.22383.16834.52702.11121.07382.16146.42835.02702.5806
H134.78734.08442.80942.12143.18874.43463.23662.15901.00524.86195.35702.5806

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 127.533 N1 C2 H10 115.634
N1 C6 C5 119.521 N1 C6 H11 117.801
C2 N1 C6 118.447 C2 N3 C4 112.480
N3 C2 H10 116.833 N3 C4 C5 125.599
N3 C4 N9 128.794 C4 C5 C6 116.419
C4 C5 N7 111.007 C4 N9 C8 105.851
C4 N9 H13 126.247 C5 C4 N9 105.607
C5 C6 H11 122.677 C5 N7 C8 103.270
C6 C5 N7 132.574 N7 C8 N9 114.265
N7 C8 H12 123.680 C8 N9 H13 127.903
N9 C8 H12 122.055
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at mPW1PW91/6-31G Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 N -0.403      
2 C 0.097      
3 N -0.368      
4 C 0.445      
5 C 0.077      
6 C 0.055      
7 N -0.420      
8 C 0.261      
9 N -0.757      
10 H 0.205      
11 H 0.213      
12 H 0.224      
13 H 0.372      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  2.255 3.113 0.000 3.844
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -50.916 6.475 0.000
y 6.475 -47.799 0.000
z 0.000 0.000 -51.990
Traceless
 xyz
x -1.021 6.475 0.000
y 6.475 3.653 0.000
z 0.000 0.000 -2.633
Polar
3z2-r2-5.265
x2-y2-3.116
xy6.475
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 14.384 1.328 0.000
y 1.328 11.178 0.000
z 0.000 0.000 3.862


<r2> (average value of r2) Å2
<r2> 256.572
(<r2>)1/2 16.018