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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: HF/CEP-121G

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at HF/CEP-121G
 hartrees
Energy at 0K-44.255850
Energy at 298.15K-44.268991
Nuclear repulsion energy134.809464
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at HF/CEP-121G
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3222 2940 83.74      
2 A' 3210 2929 47.66      
3 A' 3165 2888 41.18      
4 A' 3144 2869 12.30      
5 A' 3135 2861 101.62      
6 A' 3129 2855 21.26      
7 A' 2686 2451 31.91      
8 A' 1656 1511 9.23      
9 A' 1644 1500 0.44      
10 A' 1637 1493 0.34      
11 A' 1634 1491 2.06      
12 A' 1621 1479 3.02      
13 A' 1553 1417 4.20      
14 A' 1532 1398 0.03      
15 A' 1505 1373 13.24      
16 A' 1438 1313 21.14      
17 A' 1375 1255 24.90      
18 A' 1228 1121 5.55      
19 A' 1149 1048 0.09      
20 A' 1138 1039 0.51      
21 A' 1092 996 0.67      
22 A' 970 886 0.50      
23 A' 899 821 5.34      
24 A' 748 682 13.84      
25 A' 464 423 2.69      
26 A' 365 333 0.31      
27 A' 259 236 2.34      
28 A' 120 110 1.72      
29 A" 3287 2999 43.22      
30 A" 3226 2944 180.26      
31 A" 3216 2935 0.01      
32 A" 3186 2907 14.46      
33 A" 3165 2888 1.83      
34 A" 1637 1494 7.72      
35 A" 1441 1315 0.53      
36 A" 1438 1312 0.42      
37 A" 1398 1276 0.11      
38 A" 1338 1221 0.18      
39 A" 1183 1080 1.31      
40 A" 1052 960 0.01      
41 A" 921 841 1.18      
42 A" 829 757 0.15      
43 A" 796 726 3.62      
44 A" 247 225 0.05      
45 A" 179 163 26.04      
46 A" 142 129 3.26      
47 A" 100 91 4.80      
48 A" 64 58 2.65      

Unscaled Zero Point Vibrational Energy (zpe) 37279.8 cm-1
Scaled (by 0.9125) Zero Point Vibrational Energy (zpe) 34017.8 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at HF/CEP-121G
ABC
0.47221 0.02595 0.02517

See section I.F.4 to change rotational constant units
Geometric Data calculated at HF/CEP-121G

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -1.408 3.165 0.000
H2 -2.757 3.386 0.000
C3 -1.441 1.270 0.000
H4 -1.977 0.948 0.883
H5 -1.977 0.948 -0.883
C6 0.000 0.737 0.000
H7 0.524 1.117 -0.874
H8 0.524 1.117 0.874
C9 0.043 -0.806 0.000
H10 -0.488 -1.185 0.874
H11 -0.488 -1.185 -0.874
C12 1.482 -1.364 0.000
H13 2.014 -0.986 0.873
H14 2.014 -0.986 -0.873
C15 1.527 -2.905 0.000
H16 1.031 -3.311 0.879
H17 1.031 -3.311 -0.879
H18 2.552 -3.267 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.36631.89482.45302.45302.80622.94812.94814.22804.53064.53065.37255.45015.45016.74206.97526.97527.5533
H21.36632.49142.70782.70783.82274.08354.08355.04115.17675.17676.36626.52956.52957.61057.74357.74358.5114
C31.89482.49141.08211.08211.53622.15592.15592.55232.77432.77433.93494.21764.21765.12235.27895.27896.0440
H42.45302.70781.08211.76652.17513.06082.50642.81722.60073.13864.25304.43444.76945.28185.21345.50326.2493
H52.45302.70781.08211.76652.17512.50643.06082.81723.13862.60074.25304.76944.43445.28185.50325.21346.2493
C62.80623.82271.53622.17512.17511.08711.08711.54442.16682.16682.57162.79082.79083.94944.26894.26894.7486
H72.94814.08352.15593.06082.50641.08711.74722.16643.06162.51402.79923.11322.57744.23594.78894.45664.9087
H82.94814.08352.15592.50643.06081.08711.74722.16642.51403.06162.79922.57743.11324.23594.45664.78894.9087
C94.22805.04112.55232.81722.81721.54442.16642.16641.09001.09001.54342.16272.16272.57002.83202.83203.5142
H104.53065.17672.77432.60073.13862.16683.06162.51401.09001.74752.16262.50943.05722.78952.61283.14633.7869
H114.53065.17672.77433.13862.60072.16682.51403.06161.09001.74752.16263.05722.50942.78953.14632.61283.7869
C125.37256.36623.93494.25304.25302.57162.79922.79921.54342.16262.16261.08921.08921.54162.18352.18352.1833
H135.45016.52954.21764.43444.76942.79083.11322.57742.16272.50943.05721.08921.74532.16312.52393.07212.5006
H145.45016.52954.21764.76944.43442.79082.57743.11322.16273.05722.50941.08921.74532.16313.07212.52392.5006
C156.74207.61055.12235.28185.28183.94944.23594.23592.57002.78952.78951.54162.16312.16311.08801.08801.0872
H166.97527.74355.27895.21345.50324.26894.78894.45662.83202.61283.14632.18352.52393.07211.08801.75801.7575
H176.97527.74355.27895.50325.21344.26894.45664.78892.83203.14632.61282.18353.07212.52391.08801.75801.7575
H187.55338.51146.04406.24936.24934.74864.90874.90873.51423.78693.78692.18332.50062.50061.08721.75751.7575

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 107.832 S1 C3 H5 107.832
S1 C3 C6 109.307 H2 S1 C3 98.329
C3 C6 H7 109.342 C3 C6 H8 109.342
C3 C6 C9 111.889 H4 C3 H5 109.424
H4 C3 C6 111.164 H5 C3 C6 111.164
C6 C9 H10 109.461 C6 C9 H11 109.461
C6 C9 C12 112.775 H7 C6 H8 106.942
H7 C6 C9 109.599 H8 C6 C9 109.599
C9 C12 H13 109.255 C9 C12 H14 109.255
C9 C12 C15 112.828 H10 C9 H11 106.558
H10 C9 C12 109.197 H11 C9 C12 109.197
C12 C15 H16 111.093 C12 C15 H17 111.093
C12 C15 H18 111.122 H13 C12 H14 106.481
H13 C12 C15 109.410 H14 C12 C15 109.410
H16 C15 H17 107.782 H16 C15 H18 107.796
H17 C15 H18 107.796
Electronic energy levels

Electronic state

Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at HF/CEP-121G Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S 0.042      
2 H 0.046      
3 C -0.557      
4 H 0.174      
5 H 0.174      
6 C -0.184      
7 H 0.143      
8 H 0.143      
9 C -0.229      
10 H 0.118      
11 H 0.118      
12 C -0.196      
13 H 0.123      
14 H 0.123      
15 C -0.461      
16 H 0.137      
17 H 0.137      
18 H 0.149      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  -0.865 -2.100 0.000 2.271
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -42.705 -1.803 0.000
y -1.803 -57.002 0.000
z 0.000 0.000 -48.371
Traceless
 xyz
x 9.982 -1.803 0.000
y -1.803 -11.465 0.000
z 0.000 0.000 1.483
Polar
3z2-r22.965
x2-y214.298
xy-1.803
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 10.565 -1.653 0.000
y -1.653 13.176 0.000
z 0.000 0.000 8.702


<r2> (average value of r2) Å2
<r2> 275.641
(<r2>)1/2 16.602