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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: HF/LANL2DZ

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at HF/LANL2DZ
 hartrees
Energy at 0K-206.145091
Energy at 298.15K-206.158237
Nuclear repulsion energy220.281108
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at HF/LANL2DZ
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3272 2945 84.34      
2 A' 3268 2941 47.69      
3 A' 3217 2895 44.03      
4 A' 3198 2878 15.02      
5 A' 3190 2871 97.54      
6 A' 3184 2865 24.65      
7 A' 2707 2436 41.00      
8 A' 1663 1496 12.54      
9 A' 1653 1487 0.81      
10 A' 1647 1482 1.25      
11 A' 1645 1480 1.74      
12 A' 1637 1473 3.73      
13 A' 1566 1410 6.36      
14 A' 1542 1388 0.04      
15 A' 1519 1367 10.73      
16 A' 1458 1312 22.16      
17 A' 1399 1259 12.66      
18 A' 1239 1115 8.15      
19 A' 1157 1041 0.11      
20 A' 1147 1032 0.46      
21 A' 1100 990 0.63      
22 A' 979 881 0.95      
23 A' 915 823 5.57      
24 A' 747 673 11.63      
25 A' 470 423 2.96      
26 A' 369 332 0.38      
27 A' 263 237 2.47      
28 A' 123 111 1.63      
29 A" 3339 3004 47.29      
30 A" 3277 2949 187.55      
31 A" 3268 2941 0.00      
32 A" 3240 2916 13.98      
33 A" 3220 2898 1.71      
34 A" 1647 1482 9.89      
35 A" 1454 1308 0.99      
36 A" 1449 1304 0.45      
37 A" 1411 1270 0.20      
38 A" 1350 1215 0.03      
39 A" 1198 1078 0.98      
40 A" 1062 956 0.00      
41 A" 930 837 1.64      
42 A" 840 756 0.34      
43 A" 806 725 5.81      
44 A" 252 227 0.05      
45 A" 183 164 27.45      
46 A" 146 132 3.17      
47 A" 105 95 5.41      
48 A" 66 59 2.62      

Unscaled Zero Point Vibrational Energy (zpe) 37756.1 cm-1
Scaled (by 0.8999) Zero Point Vibrational Energy (zpe) 33976.7 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at HF/LANL2DZ
ABC
0.47500 0.02613 0.02534

See section I.F.4 to change rotational constant units
Geometric Data calculated at HF/LANL2DZ

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 1.593 -3.224 0.000
H2 2.933 -3.408 0.000
C3 1.555 -1.336 0.000
H4 2.075 -0.991 0.880
H5 2.075 -0.991 -0.880
C6 0.099 -0.858 0.000
H7 -0.410 -1.254 -0.872
H8 -0.410 -1.254 0.872
C9 0.000 0.678 0.000
H10 0.514 1.075 0.872
H11 0.514 1.075 -0.872
C12 -1.455 1.177 0.000
H13 -1.970 0.780 0.871
H14 -1.970 0.780 -0.871
C15 -1.558 2.711 0.000
H16 -1.078 3.133 0.877
H17 -1.078 3.133 -0.877
H18 -2.594 3.034 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.35291.88772.44792.44792.79772.94152.94154.21444.51734.51735.35315.43015.43016.71876.95076.95077.5286
H21.35292.48832.71162.71163.81224.07174.07175.02995.16845.16846.34666.50726.50727.58987.72307.72308.4876
C31.88772.48831.07941.07941.53192.15142.15142.54462.76762.76763.92124.20284.20285.10545.26085.26086.0253
H42.44792.71161.07941.76042.16713.05252.49952.80482.58973.12684.23544.41624.75075.26075.19145.48086.2265
H52.44792.71161.07941.76042.16712.49953.05252.80483.12682.58974.23544.75074.41625.26075.48085.19146.2265
C62.79773.81221.53192.16712.16711.08511.08511.53932.16112.16112.56072.77952.77953.93454.25264.25264.7325
H72.94154.07172.15143.05252.49951.08511.74412.15943.05352.50642.78613.10012.56364.21854.77024.43784.8900
H82.94154.07172.15142.49953.05251.08511.74412.15942.50643.05352.78612.56363.10014.21854.43784.77024.8900
C94.21445.02992.54462.80482.80481.53932.15942.15941.08751.08751.53842.15662.15662.56082.82112.82113.5036
H104.51735.16842.76762.58973.12682.16113.05352.50641.08751.74422.15642.50193.04922.77992.60183.13533.7755
H114.51735.16842.76763.12682.58972.16112.50643.05351.08751.74422.15643.04922.50192.77993.13532.60183.7755
C125.35316.34663.92124.23544.23542.56072.78612.78611.53842.15642.15641.08671.08671.53712.17702.17702.1779
H135.43016.50724.20284.41624.75072.77953.10012.56362.15662.50193.04921.08671.74202.15732.51633.06412.4948
H145.43016.50724.20284.75074.41622.77952.56363.10012.15663.04922.50191.08671.74202.15733.06412.51632.4948
C156.71877.58985.10545.26075.26073.93454.21854.21852.56082.77992.77991.53712.15732.15731.08581.08581.0850
H166.95077.72305.26085.19145.48084.25264.77024.43782.82112.60183.13532.17702.51633.06411.08581.75471.7542
H176.95077.72305.26085.48085.19144.25264.43784.77022.82113.13532.60182.17703.06412.51631.08581.75471.7542
H187.52868.48766.02536.22656.22654.73254.89004.89003.50363.77553.77552.17792.49482.49481.08501.75421.7542

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 108.070 S1 C3 H5 108.070
S1 C3 C6 109.360 H2 S1 C3 98.988
C3 C6 H7 109.407 C3 C6 H8 109.407
C3 C6 C9 111.898 H4 C3 H5 109.268
H4 C3 C6 110.991 H5 C3 C6 110.991
C6 C9 H10 109.510 C6 C9 H11 109.510
C6 C9 C12 112.611 H7 C6 H8 106.967
H7 C6 C9 109.518 H8 C6 C9 109.518
C9 C12 H13 109.266 C9 C12 H14 109.266
C9 C12 C15 112.739 H10 C9 H11 106.628
H10 C9 C12 109.201 H11 C9 C12 109.201
C12 C15 H16 111.035 C12 C15 H17 111.035
C12 C15 H18 111.151 H13 C12 H14 106.550
H13 C12 C15 109.414 H14 C12 C15 109.414
H16 C15 H17 107.813 H16 C15 H18 107.827
H17 C15 H18 107.827
Electronic energy levels

Electronic state

Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at HF/LANL2DZ Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S -0.034      
2 H 0.057      
3 C -0.602      
4 H 0.214      
5 H 0.214      
6 C -0.219      
7 H 0.172      
8 H 0.172      
9 C -0.259      
10 H 0.146      
11 H 0.146      
12 C -0.261      
13 H 0.153      
14 H 0.153      
15 C -0.563      
16 H 0.165      
17 H 0.165      
18 H 0.179      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  0.720 2.156 0.000 2.273
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -42.742 -0.851 0.000
y -0.851 -57.827 0.000
z 0.000 0.000 -48.120
Traceless
 xyz
x 10.232 -0.851 0.000
y -0.851 -12.396 0.000
z 0.000 0.000 2.164
Polar
3z2-r24.328
x2-y215.085
xy-0.851
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 9.853 -1.714 0.000
y -1.714 12.231 0.000
z 0.000 0.000 7.123


<r2> (average value of r2) Å2
<r2> 312.278
(<r2>)1/2 17.671