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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: HF/aug-cc-pVTZ

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at HF/aug-cc-pVTZ
 hartrees
Energy at 0K-593.950648
Energy at 298.15K-593.963882
Nuclear repulsion energy288.028792
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at HF/aug-cc-pVTZ
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3211 2923 62.20      
2 A' 3197 2910 39.27      
3 A' 3158 2875 40.45      
4 A' 3151 2869 38.81      
5 A' 3144 2862 34.18      
6 A' 3135 2854 8.96      
7 A' 2850 2595 5.01      
8 A' 1631 1485 7.18      
9 A' 1621 1476 0.05      
10 A' 1612 1468 4.03      
11 A' 1610 1466 0.19      
12 A' 1606 1462 0.16      
13 A' 1542 1404 0.03      
14 A' 1537 1400 2.57      
15 A' 1501 1366 8.52      
16 A' 1428 1300 8.18      
17 A' 1356 1235 21.06      
18 A' 1224 1114 2.55      
19 A' 1129 1028 0.09      
20 A' 1125 1025 0.05      
21 A' 1088 990 0.38      
22 A' 966 879 0.23      
23 A' 938 854 1.66      
24 A' 791 720 5.87      
25 A' 468 426 1.36      
26 A' 369 336 0.23      
27 A' 264 240 1.13      
28 A' 123 112 1.08      
29 A" 3245 2955 31.32      
30 A" 3209 2922 113.65      
31 A" 3192 2906 18.04      
32 A" 3170 2886 6.56      
33 A" 3150 2868 0.89      
34 A" 1614 1470 6.11      
35 A" 1442 1313 0.26      
36 A" 1440 1311 0.43      
37 A" 1393 1269 0.06      
38 A" 1327 1208 0.19      
39 A" 1172 1067 1.26      
40 A" 1039 946 0.06      
41 A" 906 825 0.88      
42 A" 813 740 0.04      
43 A" 783 713 2.67      
44 A" 263 239 0.04      
45 A" 202 184 13.32      
46 A" 150 136 1.64      
47 A" 107 97 2.74      
48 A" 67 61 2.16      

Unscaled Zero Point Vibrational Energy (zpe) 37229.4 cm-1
Scaled (by 0.9104) Zero Point Vibrational Energy (zpe) 33893.7 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at HF/aug-cc-pVTZ
ABC
0.48554 0.02671 0.02591

See section I.F.4 to change rotational constant units
Geometric Data calculated at HF/aug-cc-pVTZ

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -2.426 1.647 0.000
H2 -3.656 1.143 0.000
C3 -1.497 0.075 0.000
H4 -1.774 -0.492 0.877
H5 -1.774 -0.492 -0.877
C6 0.000 0.358 0.000
H7 0.251 0.956 -0.871
H8 0.251 0.956 0.871
C9 0.833 -0.921 0.000
H10 0.575 -1.520 0.870
H11 0.575 -1.520 -0.870
C12 2.336 -0.657 0.000
H13 2.595 -0.058 0.869
H14 2.595 -0.058 -0.869
C15 3.168 -1.935 0.000
H16 2.957 -2.539 0.876
H17 2.957 -2.539 -0.876
H18 4.228 -1.712 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.32931.82612.40252.40252.74712.89882.89884.14944.44864.44865.29015.37315.37316.64226.87506.87507.4541
H21.32932.40812.64282.64283.73904.00714.00714.94065.07375.07376.25626.42386.42387.48547.61897.61898.3850
C31.82612.40811.08061.08061.52402.14282.14282.53442.75562.75563.90274.18534.18535.07955.23825.23825.9980
H42.40252.64281.08061.75472.15413.04202.48962.78392.56363.10254.20584.38994.72465.22215.15455.44456.1874
H52.40252.64281.08061.75472.15412.48963.04202.78393.10252.56364.20584.72464.38995.22215.44455.15456.1874
C62.74713.73901.52402.15412.15411.08541.08541.52692.14812.14812.54712.76782.76783.91064.23144.23144.7079
H72.89884.00712.14283.04202.48961.08541.74142.14943.04352.49652.77593.08992.55354.19764.75244.41984.8676
H82.89884.00712.14282.48963.04201.08541.74142.14942.49653.04352.77592.55353.08994.19764.41984.75244.8676
C94.14944.94062.53442.78392.78391.52692.14942.14941.08711.08711.52622.14542.14542.54522.80982.80983.4861
H104.44865.07372.75562.56363.10252.14813.04352.49651.08711.74042.14572.49283.03962.76632.59093.12443.7606
H114.44865.07372.75563.10252.56362.14812.49653.04351.08711.74042.14573.03962.49282.76633.12442.59093.7606
C125.29016.25623.90274.20584.20582.54712.77592.77591.52622.14572.14571.08631.08631.52492.16712.16712.1666
H135.37316.42384.18534.38994.72462.76783.08992.55352.14542.49283.03961.08631.73842.14582.50693.05452.4817
H145.37316.42384.18534.72464.38992.76782.55353.08992.14543.03962.49281.08631.73842.14583.05452.50692.4817
C156.64227.48545.07955.22215.22213.91064.19764.19762.54522.76632.76631.52492.14582.14581.08491.08491.0837
H166.87507.61895.23825.15455.44454.23144.75244.41982.80982.59093.12442.16712.50693.05451.08491.75191.7516
H176.87507.61895.23825.44455.15454.23144.41984.75242.80983.12442.59092.16713.05452.50691.08491.75191.7516
H187.45418.38505.99806.18746.18744.70794.86764.86763.48613.76063.76062.16662.48172.48171.08371.75161.7516

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 108.769 S1 C3 H5 108.769
S1 C3 C6 109.842 H2 S1 C3 98.260
C3 C6 H7 109.252 C3 C6 H8 109.252
C3 C6 C9 112.341 H4 C3 H5 108.557
H4 C3 C6 110.430 H5 C3 C6 110.430
C6 C9 H10 109.370 C6 C9 H11 109.370
C6 C9 C12 113.080 H7 C6 H8 106.677
H7 C6 C9 109.577 H8 C6 C9 109.577
C9 C12 H13 109.253 C9 C12 H14 109.253
C9 C12 C15 113.064 H10 C9 H11 106.343
H10 C9 C12 109.227 H11 C9 C12 109.227
C12 C15 H16 111.154 C12 C15 H17 111.154
C12 C15 H18 111.185 H13 C12 H14 106.288
H13 C12 C15 109.379 H14 C12 C15 109.379
H16 C15 H17 107.687 H16 C15 H18 107.746
H17 C15 H18 107.746
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at HF/aug-cc-pVTZ Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S -0.351      
2 H 0.025      
3 C -0.418      
4 H 0.260      
5 H 0.260      
6 C -0.443      
7 H 0.285      
8 H 0.285      
9 C -0.265      
10 H 0.271      
11 H 0.271      
12 C -0.477      
13 H 0.243      
14 H 0.243      
15 C -0.998      
16 H 0.268      
17 H 0.268      
18 H 0.272      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  0.477 -1.777 0.000 1.840
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -46.334 4.021 0.000
y 4.021 -52.529 0.000
z 0.000 0.000 -48.808
Traceless
 xyz
x 4.335 4.021 0.000
y 4.021 -4.958 0.000
z 0.000 0.000 0.623
Polar
3z2-r21.247
x2-y26.195
xy4.021
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 13.996 -1.997 0.000
y -1.997 12.121 0.000
z 0.000 0.000 10.263


<r2> (average value of r2) Å2
<r2> 410.785
(<r2>)1/2 20.268