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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: HF/cc-pVTZ

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at HF/cc-pVTZ
 hartrees
Energy at 0K-593.948754
Energy at 298.15K-593.961998
Nuclear repulsion energy288.042058
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at HF/cc-pVTZ
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3211 2923 63.32      
2 A' 3195 2908 42.34      
3 A' 3158 2874 41.89      
4 A' 3151 2868 39.18      
5 A' 3143 2861 34.11      
6 A' 3135 2853 8.83      
7 A' 2848 2592 7.47      
8 A' 1632 1485 6.76      
9 A' 1622 1476 0.05      
10 A' 1613 1468 3.93      
11 A' 1610 1465 0.17      
12 A' 1607 1462 0.16      
13 A' 1542 1404 0.05      
14 A' 1538 1400 2.69      
15 A' 1501 1366 8.60      
16 A' 1428 1300 8.37      
17 A' 1357 1235 19.73      
18 A' 1224 1114 2.72      
19 A' 1130 1028 0.08      
20 A' 1127 1025 0.05      
21 A' 1089 991 0.40      
22 A' 966 880 0.23      
23 A' 939 855 1.83      
24 A' 792 721 5.46      
25 A' 468 426 1.35      
26 A' 369 336 0.24      
27 A' 264 240 1.12      
28 A' 123 112 1.07      
29 A" 3245 2953 39.01      
30 A" 3209 2921 116.29      
31 A" 3192 2905 17.99      
32 A" 3170 2885 6.72      
33 A" 3150 2867 0.91      
34 A" 1615 1470 6.07      
35 A" 1442 1312 0.22      
36 A" 1440 1310 0.62      
37 A" 1393 1268 0.12      
38 A" 1327 1208 0.24      
39 A" 1172 1066 1.43      
40 A" 1039 946 0.05      
41 A" 906 825 0.79      
42 A" 814 741 0.03      
43 A" 784 713 2.67      
44 A" 263 239 0.05      
45 A" 205 186 15.02      
46 A" 151 137 1.59      
47 A" 108 98 2.82      
48 A" 68 62 1.97      

Unscaled Zero Point Vibrational Energy (zpe) 37235.4 cm-1
Scaled (by 0.9101) Zero Point Vibrational Energy (zpe) 33888.0 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at HF/cc-pVTZ
ABC
0.48533 0.02672 0.02592

See section I.F.4 to change rotational constant units
Geometric Data calculated at HF/cc-pVTZ

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -2.424 1.649 0.000
H2 -3.654 1.144 0.000
C3 -1.497 0.076 0.000
H4 -1.774 -0.491 0.877
H5 -1.774 -0.491 -0.877
C6 0.000 0.358 0.000
H7 0.252 0.956 -0.871
H8 0.252 0.956 0.871
C9 0.832 -0.922 0.000
H10 0.573 -1.520 0.870
H11 0.573 -1.520 -0.870
C12 2.335 -0.659 0.000
H13 2.594 -0.061 0.869
H14 2.594 -0.061 -0.869
C15 3.166 -1.937 0.000
H16 2.954 -2.542 0.876
H17 2.954 -2.542 -0.876
H18 4.227 -1.715 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.32951.82602.40322.40322.74652.89792.89794.14904.44854.44855.28925.37225.37226.64156.87456.87457.4533
H21.32952.40632.64162.64163.73734.00554.00554.93865.07195.07196.25436.42196.42197.48337.61707.61708.3830
C31.82602.40631.08081.08081.52392.14262.14262.53422.75572.75573.90244.18514.18515.07935.23815.23815.9978
H42.40322.64161.08081.75472.15373.04172.48932.78322.56303.10214.20514.38934.72405.22135.15375.44386.1867
H52.40322.64161.08081.75472.15372.48933.04172.78323.10212.56304.20514.72404.38935.22135.44385.15376.1867
C62.74653.73731.52392.15372.15371.08551.08551.52682.14822.14822.54692.76772.76773.91044.23134.23134.7078
H72.89794.00552.14263.04172.48931.08551.74132.14963.04382.49692.77583.08992.55344.19764.75254.41994.8676
H82.89794.00552.14262.48933.04171.08551.74132.14962.49693.04382.77582.55343.08994.19764.41994.75254.8676
C94.14904.93862.53422.78322.78321.52682.14962.14961.08721.08721.52622.14552.14552.54502.80972.80973.4861
H104.44855.07192.75572.56303.10212.14823.04382.49691.08721.74042.14582.49293.03982.76622.59083.12433.7605
H114.44855.07192.75573.10212.56302.14822.49693.04381.08721.74042.14583.03982.49292.76623.12432.59083.7605
C125.28926.25433.90244.20514.20512.54692.77582.77581.52622.14582.14581.08641.08641.52492.16722.16722.1667
H135.37226.42194.18514.38934.72402.76773.08992.55342.14552.49293.03981.08641.73852.14592.50713.05472.4818
H145.37226.42194.18514.72404.38932.76772.55343.08992.14553.03982.49291.08641.73852.14593.05472.50712.4818
C156.64157.48335.07935.22135.22133.91044.19764.19762.54502.76622.76621.52492.14592.14591.08491.08491.0838
H166.87457.61705.23815.15375.44384.23134.75254.41992.80972.59083.12432.16722.50713.05471.08491.75181.7517
H176.87457.61705.23815.44385.15374.23134.41994.75252.80973.12432.59082.16723.05472.50711.08491.75181.7517
H187.45338.38305.99786.18676.18674.70784.86764.86763.48613.76053.76052.16672.48182.48181.08381.75171.7517

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 108.817 S1 C3 H5 108.817
S1 C3 C6 109.816 H2 S1 C3 98.149
C3 C6 H7 109.247 C3 C6 H8 109.247
C3 C6 C9 112.344 H4 C3 H5 108.540
H4 C3 C6 110.405 H5 C3 C6 110.405
C6 C9 H10 109.379 C6 C9 H11 109.379
C6 C9 C12 113.069 H7 C6 H8 106.661
H7 C6 C9 109.589 H8 C6 C9 109.589
C9 C12 H13 109.257 C9 C12 H14 109.257
C9 C12 C15 113.056 H10 C9 H11 106.331
H10 C9 C12 109.230 H11 C9 C12 109.230
C12 C15 H16 111.161 C12 C15 H17 111.161
C12 C15 H18 111.188 H13 C12 H14 106.286
H13 C12 C15 109.379 H14 C12 C15 109.379
H16 C15 H17 107.676 H16 C15 H18 107.743
H17 C15 H18 107.743
Electronic energy levels

Electronic state

Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at HF/cc-pVTZ Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S -0.203 -0.378 0.286 -0.365
2 H 0.090 0.196 -0.359 0.205
3 C -0.146 -0.096 0.045 -0.263
4 H 0.111 0.063 -0.028 0.117
5 H 0.111 0.063 -0.028 0.117
6 C -0.189 0.225 0.166 0.215
7 H 0.108 0.002 -0.057 0.018
8 H 0.108 0.002 -0.057 0.018
9 C -0.179 -0.234 0.159 -0.214
10 H 0.092 0.043 -0.077 0.042
11 H 0.092 0.043 -0.077 0.042
12 C -0.169 0.258 0.171 0.264
13 H 0.094 -0.065 -0.074 -0.061
14 H 0.094 -0.065 -0.074 -0.061
15 C -0.300 -0.091 0.171 -0.182
16 H 0.090 0.011 -0.064 0.035
17 H 0.090 0.011 -0.064 0.035
18 H 0.105 0.011 -0.058 0.038


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  0.418 -1.753 0.000 1.803
CHELPG        
AIM -0.983 -0.889 0.000 1.326
ESP 0.391 -1.811 0.000 1.853


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -46.061 3.903 0.000
y 3.903 -52.447 0.000
z 0.000 0.000 -48.673
Traceless
 xyz
x 4.500 3.903 0.000
y 3.903 -5.080 0.000
z 0.000 0.000 0.581
Polar
3z2-r21.161
x2-y26.387
xy3.903
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 13.366 -1.952 0.000
y -1.952 11.441 0.000
z 0.000 0.000 9.157


<r2> (average value of r2) Å2
<r2> 410.600
(<r2>)1/2 20.263