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All results from a given calculation for C5H4N4 (purine)

using model chemistry: CCSD/6-31G*

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at CCSD/6-31G*
 hartrees
Energy at 0K-410.757871
Energy at 298.15K-410.765650
HF Energy-409.466861
Nuclear repulsion energy411.743756
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at CCSD/6-31G*
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3680 3475 105.87      
2 A' 3281 3098 1.56      
3 A' 3227 3047 18.47      
4 A' 3213 3034 11.77      
5 A' 1704 1609 69.36      
6 A' 1673 1580 80.04      
7 A' 1583 1495 29.96      
8 A' 1532 1447 17.17      
9 A' 1472 1390 83.64      
10 A' 1453 1372 8.34      
11 A' 1400 1322 64.16      
12 A' 1349 1274 13.74      
13 A' 1319 1245 8.42      
14 A' 1257 1187 56.21      
15 A' 1232 1163 3.15      
16 A' 1151 1087 7.37      
17 A' 1113 1051 14.36      
18 A' 960 906 0.32      
19 A' 927 876 15.14      
20 A' 817 772 14.58      
21 A' 667 629 0.38      
22 A' 577 544 3.46      
23 A' 444 419 13.54      
24 A" 995 940 0.08      
25 A" 931 879 11.13      
26 A" 885 836 8.99      
27 A" 752 710 8.45      
28 A" 665 628 5.50      
29 A" 612 578 30.41      
30 A" 487 460 121.38      
31 A" 411 388 9.31      
32 A" 245 231 0.01      
33 A" 227 215 4.84      

Unscaled Zero Point Vibrational Energy (zpe) 21120.5 cm-1
Scaled (by 0.9443) Zero Point Vibrational Energy (zpe) 19944.0 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at CCSD/6-31G*
ABC
0.13746 0.05836 0.04096

See section I.F.4 to change rotational constant units
Geometric Data calculated at CCSD/6-31G*

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.818 -1.262 0.000
C2 -2.105 0.065 0.000
N3 -1.275 1.103 0.000
C4 0.000 0.703 0.000
C5 0.452 -0.622 0.000
C6 -0.537 -1.610 0.000
N7 1.840 -0.690 0.000
C8 2.184 0.571 0.000
N9 1.128 1.468 0.000
H10 -3.164 0.303 0.000
H11 -0.307 -2.674 0.000
H12 3.212 0.907 0.000
H13 1.169 2.479 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.35712.42632.67662.35821.32753.70204.40114.01602.06362.06795.47724.7867
C21.35711.32902.19922.64732.29424.01604.31813.52391.08543.27585.38284.0676
N32.42631.32901.33662.44132.81213.59433.49972.43062.05113.89924.49152.8050
C42.67662.19921.33661.39992.37462.30762.18771.36293.18893.39083.21842.1261
C52.35822.64732.44131.39991.39801.38952.10272.19653.73202.18793.15493.1825
C61.32752.29422.81212.37461.39802.54863.48683.49953.24951.08824.51524.4305
N73.70204.01603.59432.30761.38952.54861.30672.27245.10102.92332.10513.2387
C84.40114.31813.49972.18772.10273.48681.30671.38565.35414.09051.08172.1607
N94.01603.52392.43061.36292.19653.49952.27241.38564.44694.38342.15831.0114
H102.06361.08542.05113.18893.73203.24955.10105.35414.44694.12546.40414.8487
H112.06793.27583.89923.39082.18791.08822.92334.09054.38344.12545.02045.3599
H125.47725.38284.49153.21843.15494.51522.10511.08172.15836.40415.02042.5774
H134.78674.06762.80502.12613.18254.43053.23872.16071.01144.84875.35992.5774

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 129.185 N1 C2 H10 114.859
N1 C6 C5 119.801 N1 C6 H11 117.401
C2 N1 C6 117.421 C2 N3 C4 111.188
N3 C2 H10 115.956 N3 C4 C5 126.264
N3 C4 N9 128.425 C4 C5 C6 116.141
C4 C5 N7 111.643 C4 N9 C8 105.492
C4 N9 H13 126.505 C5 C4 N9 105.311
C5 C6 H11 122.798 C5 N7 C8 102.455
C6 C5 N7 132.216 N7 C8 N9 115.100
N7 C8 H12 123.349 C8 N9 H13 128.003
N9 C8 H12 121.551
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability