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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: BLYP/cc-pVTZ

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at BLYP/cc-pVTZ
 hartrees
Energy at 0K-595.906220
Energy at 298.15K-595.918873
Nuclear repulsion energy284.285304
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at BLYP/cc-pVTZ
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3011 3002 43.33      
2 A' 2978 2969 39.14      
3 A' 2953 2944 47.64      
4 A' 2948 2939 36.76      
5 A' 2938 2930 14.96      
6 A' 2927 2918 5.61      
7 A' 2588 2580 9.61      
8 A' 1481 1477 5.97      
9 A' 1471 1466 0.24      
10 A' 1459 1455 1.01      
11 A' 1453 1449 1.01      
12 A' 1450 1446 0.72      
13 A' 1385 1381 1.12      
14 A' 1354 1350 0.46      
15 A' 1339 1335 7.36      
16 A' 1279 1276 4.22      
17 A' 1213 1210 22.36      
18 A' 1100 1097 2.82      
19 A' 1022 1019 0.62      
20 A' 1016 1013 0.91      
21 A' 980 977 0.19      
22 A' 876 873 0.49      
23 A' 827 825 0.43      
24 A' 687 685 5.12      
25 A' 425 424 1.44      
26 A' 336 335 0.23      
27 A' 238 237 1.02      
28 A' 115 115 0.93      
29 A" 3023 3014 30.72      
30 A" 3006 2997 62.55      
31 A" 2980 2971 36.35      
32 A" 2962 2953 5.31      
33 A" 2942 2933 0.82      
34 A" 1469 1465 6.08      
35 A" 1304 1300 0.24      
36 A" 1299 1295 0.51      
37 A" 1255 1252 0.16      
38 A" 1192 1189 0.22      
39 A" 1051 1048 1.56      
40 A" 944 941 0.07      
41 A" 826 824 1.22      
42 A" 746 744 0.07      
43 A" 721 719 4.01      
44 A" 243 242 0.01      
45 A" 172 171 10.31      
46 A" 143 143 1.34      
47 A" 97 96 2.09      
48 A" 64 64 1.60      

Unscaled Zero Point Vibrational Energy (zpe) 34143.8 cm-1
Scaled (by 0.997) Zero Point Vibrational Energy (zpe) 34041.3 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at BLYP/cc-pVTZ
ABC
0.47248 0.02603 0.02525

See section I.F.4 to change rotational constant units
Geometric Data calculated at BLYP/cc-pVTZ

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -2.445 1.695 0.000
H2 -3.690 1.159 0.000
C3 -1.510 0.079 0.000
H4 -1.800 -0.489 0.890
H5 -1.800 -0.489 -0.890
C6 0.000 0.355 0.000
H7 0.259 0.960 -0.881
H8 0.259 0.960 0.881
C9 0.838 -0.940 0.000
H10 0.573 -1.546 0.880
H11 0.573 -1.546 -0.880
C12 2.359 -0.686 0.000
H13 2.623 -0.079 0.879
H14 2.623 -0.079 -0.879
C15 3.193 -1.979 0.000
H16 2.977 -2.591 0.886
H17 2.977 -2.591 -0.886
H18 4.268 -1.761 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.35561.86752.44552.44552.78832.93732.93734.21034.51604.51605.36145.44175.44176.72966.96866.96867.5505
H21.35562.43302.66102.66103.77664.05084.05084.99125.12555.12556.32376.49366.49367.56457.70087.70088.4768
C31.86752.43301.09521.09521.53502.16362.16362.55982.78502.78503.94344.22884.22885.13335.29625.29626.0637
H42.44552.66101.09521.78092.17843.07842.51752.82092.59833.14434.25754.44244.78195.28595.21945.51346.2634
H52.44552.66101.09521.78092.17842.51753.07842.82093.14432.59834.25754.78194.44245.28595.51345.21946.2634
C62.78833.77661.53502.17842.17841.09971.09971.54292.17242.17242.57802.80082.80083.95514.28144.28144.7637
H72.93734.05082.16363.07842.51751.09971.76252.17323.07962.52602.80963.12592.58314.24554.80894.47244.9248
H82.93734.05082.16362.51753.07841.09971.76252.17322.52603.07962.80962.58313.12594.24554.47244.80894.9248
C94.21034.99122.55982.82092.82091.54292.17322.17321.10121.10121.54162.16812.16812.57352.84362.84363.5265
H104.51605.12552.78502.59833.14432.17243.07962.52601.10121.76072.16882.52093.07432.79702.62123.16083.8041
H114.51605.12552.78503.14432.59832.17242.52603.07961.10121.76072.16883.07432.52092.79703.16082.62123.8041
C125.36146.32373.94344.25754.25752.57802.80962.80961.54162.16882.16881.10031.10031.53932.19092.19092.1913
H135.44176.49364.22884.44244.78192.80083.12592.58312.16812.52093.07431.10031.75842.16952.53683.09052.5110
H145.44176.49364.22884.78194.44242.80082.58313.12592.16813.07432.52091.10031.75842.16953.09052.53682.5110
C156.72967.56455.13335.28595.28593.95514.24554.24552.57352.79702.79701.53932.16952.16951.09821.09821.0971
H166.96867.70085.29625.21945.51344.28144.80894.47242.84362.62123.16082.19092.53683.09051.09821.77201.7721
H176.96867.70085.29625.51345.21944.28144.47244.80892.84363.16082.62122.19093.09052.53681.09821.77201.7721
H187.55058.47686.06376.26346.26344.76374.92484.92483.52653.80413.80412.19132.51102.51101.09711.77211.7721

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 108.431 S1 C3 H5 108.431
S1 C3 C6 109.680 H2 S1 C3 96.740
C3 C6 H7 109.291 C3 C6 H8 109.291
C3 C6 C9 112.543 H4 C3 H5 108.788
H4 C3 C6 110.723 H5 C3 C6 110.723
C6 C9 H10 109.353 C6 C9 H11 109.353
C6 C9 C12 113.403 H7 C6 H8 106.517
H7 C6 C9 109.508 H8 C6 C9 109.508
C9 C12 H13 109.169 C9 C12 H14 109.169
C9 C12 C15 113.299 H10 C9 H11 106.153
H10 C9 C12 109.161 H11 C9 C12 109.161
C12 C15 H16 111.230 C12 C15 H17 111.230
C12 C15 H18 111.332 H13 C12 H14 106.089
H13 C12 C15 109.431 H14 C12 C15 109.431
H16 C15 H17 107.562 H16 C15 H18 107.650
H17 C15 H18 107.650
Electronic energy levels

Electronic state

Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at BLYP/cc-pVTZ Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S -0.162      
2 H 0.073      
3 C -0.156      
4 H 0.098      
5 H 0.098      
6 C -0.137      
7 H 0.086      
8 H 0.086      
9 C -0.123      
10 H 0.071      
11 H 0.071      
12 C -0.127      
13 H 0.075      
14 H 0.075      
15 C -0.286      
16 H 0.084      
17 H 0.084      
18 H 0.090      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  0.465 -1.596 0.000 1.662
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -46.710 3.541 0.000
y 3.541 -52.427 0.000
z 0.000 0.000 -49.173
Traceless
 xyz
x 4.090 3.541 0.000
y 3.541 -4.485 0.000
z 0.000 0.000 0.395
Polar
3z2-r20.791
x2-y25.717
xy3.541
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 0.000 0.000 0.000
y 0.000 0.000 0.000
z 0.000 0.000 0.000


<r2> (average value of r2) Å2
<r2> 420.768
(<r2>)1/2 20.513