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All results from a given calculation for C5H4N4 (purine)

using model chemistry: CID/6-31G*

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at CID/6-31G*
 hartrees
Energy at 0K-410.455267
Energy at 298.15K-410.463403
HF Energy-409.471067
Nuclear repulsion energy415.781615
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at CID/6-31G*
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3830 3538 127.62      
2 A' 3404 3144 1.49      
3 A' 3356 3100 19.03      
4 A' 3342 3087 12.21      
5 A' 1797 1660 90.45      
6 A' 1762 1627 112.99      
7 A' 1672 1544 39.58      
8 A' 1605 1482 11.31      
9 A' 1539 1421 111.91      
10 A' 1523 1406 16.63      
11 A' 1468 1356 63.86      
12 A' 1407 1300 13.54      
13 A' 1382 1276 7.36      
14 A' 1311 1211 55.50      
15 A' 1288 1189 5.31      
16 A' 1212 1119 7.16      
17 A' 1161 1072 17.78      
18 A' 1003 926 0.79      
19 A' 968 895 15.48      
20 A' 856 790 18.60      
21 A' 696 643 0.32      
22 A' 601 555 3.85      
23 A' 467 432 14.03      
24 A" 1076 994 0.32      
25 A" 1011 934 8.24      
26 A" 972 897 4.86      
27 A" 829 766 12.36      
28 A" 702 648 11.62      
29 A" 650 600 26.89      
30 A" 544 502 137.31      
31 A" 446 412 8.08      
32 A" 265 245 0.16      
33 A" 244 225 5.30      

Unscaled Zero Point Vibrational Energy (zpe) 22191.5 cm-1
Scaled (by 0.9237) Zero Point Vibrational Energy (zpe) 20498.2 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at CID/6-31G*
ABC
0.14060 0.05935 0.04173

See section I.F.4 to change rotational constant units
Geometric Data calculated at CID/6-31G*

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.802 -1.247 0.000
C2 -2.094 0.065 0.000
N3 -1.268 1.088 0.000
C4 0.000 0.696 0.000
C5 0.446 -0.618 0.000
C6 -0.535 -1.598 0.000
N7 1.825 -0.677 0.000
C8 2.174 0.567 0.000
N9 1.124 1.455 0.000
H10 -3.145 0.301 0.000
H11 -0.311 -2.654 0.000
H12 3.197 0.895 0.000
H13 1.168 2.454 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.34452.39532.65052.33461.31483.67164.37083.98292.04962.05005.43864.7453
C21.34451.31492.18742.63062.28013.98894.29803.50541.07703.25195.35594.0430
N32.39531.31491.32672.41772.78423.56063.48112.41932.03583.86234.46872.7922
C42.65052.18741.32671.38782.35632.28392.17811.35593.17003.36513.20302.1101
C52.33462.63062.41771.38781.38711.38012.09542.18113.70702.17273.13933.1554
C61.31482.28012.78422.35631.38712.53343.46843.47513.22811.07934.48814.3955
N73.67163.98893.56062.28391.38012.53341.29222.24475.06542.91082.08643.1993
C84.37084.29803.48112.17812.09543.46841.29221.37595.32624.06881.07382.1387
N93.98293.50542.41931.35592.18113.47512.24471.37594.42214.35292.14780.9996
H102.04961.07702.03583.17003.70703.22815.06545.32624.42214.09456.36994.8203
H112.05003.25193.86233.36512.17271.07932.91084.06884.35294.09454.99035.3180
H125.43865.35594.46873.20303.13934.48812.08641.07382.14786.36994.99032.5592
H134.74534.04302.79222.11013.15544.39553.19932.13870.99964.82035.31802.5592

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 128.492 N1 C2 H10 115.200
N1 C6 C5 119.525 N1 C6 H11 117.458
C2 N1 C6 118.042 C2 N3 C4 111.800
N3 C2 H10 116.309 N3 C4 C5 125.904
N3 C4 N9 128.802 C4 C5 C6 116.237
C4 C5 N7 111.207 C4 N9 C8 105.747
C4 N9 H13 126.559 C5 C4 N9 105.294
C5 C6 H11 123.017 C5 N7 C8 103.229
C6 C5 N7 132.556 N7 C8 N9 114.524
N7 C8 H12 123.457 C8 N9 H13 127.694
N9 C8 H12 122.019
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability