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All results from a given calculation for C5H4N4 (purine)

using model chemistry: CID/6-31G

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at CID/6-31G
 hartrees
Energy at 0K-409.956123
Energy at 298.15K-409.964196
HF Energy-409.260517
Nuclear repulsion energy410.379308
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at CID/6-31G
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3817 3570 119.68      
2 A' 3393 3173 0.47      
3 A' 3355 3138 12.89      
4 A' 3324 3109 6.90      
5 A' 1734 1622 77.37      
6 A' 1692 1583 62.07      
7 A' 1591 1488 44.59      
8 A' 1552 1451 7.71      
9 A' 1496 1399 13.74      
10 A' 1489 1392 58.28      
11 A' 1421 1329 64.24      
12 A' 1372 1283 32.23      
13 A' 1347 1260 15.02      
14 A' 1253 1172 0.24      
15 A' 1249 1168 55.36      
16 A' 1163 1087 8.15      
17 A' 1137 1063 24.06      
18 A' 996 931 0.00      
19 A' 949 887 15.74      
20 A' 835 781 13.86      
21 A' 691 646 0.28      
22 A' 594 556 3.06      
23 A' 456 426 16.03      
24 A" 1030 963 0.01      
25 A" 963 900 18.32      
26 A" 922 862 5.13      
27 A" 767 718 16.74      
28 A" 682 638 19.43      
29 A" 638 597 216.28      
30 A" 628 587 7.36      
31 A" 445 416 0.33      
32 A" 263 246 2.43      
33 A" 229 214 2.84      

Unscaled Zero Point Vibrational Energy (zpe) 21735.9 cm-1
Scaled (by 0.9352) Zero Point Vibrational Energy (zpe) 20327.5 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at CID/6-31G
ABC
0.13747 0.05765 0.04062

See section I.F.4 to change rotational constant units
Geometric Data calculated at CID/6-31G

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.814 -1.271 0.000
C2 -2.132 0.055 0.000
N3 -1.287 1.086 0.000
C4 0.000 0.703 0.000
C5 0.453 -0.623 0.000
C6 -0.527 -1.619 0.000
N7 1.850 -0.673 0.000
C8 2.200 0.591 0.000
N9 1.128 1.477 0.000
H10 -3.181 0.284 0.000
H11 -0.291 -2.671 0.000
H12 3.218 0.927 0.000
H13 1.159 2.478 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.36312.41482.68122.35831.33373.71264.42534.02572.06992.06945.49104.7846
C21.36311.33312.22852.67242.31934.04784.36533.55641.07393.28975.42034.0867
N32.41481.33311.34252.43852.80993.59603.52212.44602.05723.88704.50732.8142
C42.68122.22851.34251.40132.38182.30562.20311.36763.20883.38733.22542.1194
C52.35832.67242.43851.40131.39791.39762.12732.20563.74562.17983.16923.1799
C61.33372.31932.80992.38181.39792.55833.51053.51103.26601.07824.52844.4306
N73.71264.04783.59602.30561.39762.55831.31152.26825.12122.92882.10483.2256
C84.42534.36533.52212.20312.12733.51051.31151.39155.39034.10491.07142.1552
N94.02573.55642.44601.36762.20563.51102.26821.39154.47114.38462.16131.0011
H102.06991.07392.05723.20883.74563.26605.12125.39034.47114.13356.43114.8632
H112.06943.28973.88703.38732.17981.07822.92884.10494.38464.13355.02595.3496
H125.49105.42034.50733.22543.16924.52842.10481.07142.16136.43115.02592.5776
H134.78464.08672.81422.11943.17994.43063.22562.15521.00114.86325.34962.5776

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 127.178 N1 C2 H10 115.779
N1 C6 C5 119.363 N1 C6 H11 117.795
C2 N1 C6 118.631 C2 N3 C4 112.795
N3 C2 H10 117.042 N3 C4 C5 125.414
N3 C4 N9 128.985 C4 C5 C6 116.618
C4 C5 N7 110.923 C4 N9 C8 105.971
C4 N9 H13 126.257 C5 C4 N9 105.601
C5 C6 H11 122.841 C5 N7 C8 103.440
C6 C5 N7 132.459 N7 C8 N9 114.065
N7 C8 H12 123.772 C8 N9 H13 127.772
N9 C8 H12 122.163
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability