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All results from a given calculation for C5H4N4 (purine)

using model chemistry: B3PW91/3-21G*

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at B3PW91/3-21G*
 hartrees
Energy at 0K-409.494845
Energy at 298.15K-409.502902
HF Energy-409.494845
Nuclear repulsion energy409.635335
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at B3PW91/3-21G*
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3616 3469 102.88      
2 A' 3296 3162 0.29      
3 A' 3235 3104 15.35      
4 A' 3215 3085 9.77      
5 A' 1622 1556 54.99      
6 A' 1573 1509 36.46      
7 A' 1473 1413 35.78      
8 A' 1459 1400 4.04      
9 A' 1422 1365 14.40      
10 A' 1392 1335 19.19      
11 A' 1361 1306 32.79      
12 A' 1290 1238 46.28      
13 A' 1277 1225 31.11      
14 A' 1231 1181 45.79      
15 A' 1186 1138 8.18      
16 A' 1110 1065 4.54      
17 A' 1076 1032 17.46      
18 A' 945 907 0.85      
19 A' 898 862 11.75      
20 A' 796 764 11.49      
21 A' 670 643 0.65      
22 A' 575 552 3.61      
23 A' 441 423 14.31      
24 A" 1038 996 2.94      
25 A" 984 944 14.72      
26 A" 916 879 0.17      
27 A" 889 853 31.88      
28 A" 687 660 136.05      
29 A" 676 648 24.88      
30 A" 640 614 28.59      
31 A" 456 438 2.51      
32 A" 265 255 1.25      
33 A" 248 238 5.83      

Unscaled Zero Point Vibrational Energy (zpe) 20979.1 cm-1
Scaled (by 0.9594) Zero Point Vibrational Energy (zpe) 20127.3 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at B3PW91/3-21G*
ABC
0.13680 0.05754 0.04051

See section I.F.4 to change rotational constant units
Geometric Data calculated at B3PW91/3-21G*

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.825 -1.269 0.000
C2 -2.133 0.059 0.000
N3 -1.283 1.093 0.000
C4 0.000 0.706 0.000
C5 0.456 -0.630 0.000
C6 -0.535 -1.614 0.000
N7 1.851 -0.688 0.000
C8 2.205 0.585 0.000
N9 1.132 1.481 0.000
H10 -3.187 0.296 0.000
H11 -0.289 -2.669 0.000
H12 3.227 0.923 0.000
H13 1.163 2.492 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.36382.42412.68992.36961.33593.72234.43694.03842.07502.07795.50714.8041
C21.36381.33822.22882.67922.31404.05354.36993.56071.08073.29275.42854.0965
N32.42411.33821.34052.44882.80923.60553.52572.44622.06393.89154.51322.8181
C42.68992.22881.34051.41202.38132.31762.20871.37143.21343.38793.23382.1311
C52.36962.67922.44881.41201.39671.39622.12962.21613.75932.17133.17583.2011
C61.33592.31402.80922.38131.39672.55943.51343.51513.26881.08304.53694.4435
N73.72234.05353.60552.31761.39622.55941.32132.28495.13362.91682.11813.2538
C84.43694.36993.52572.20872.12963.51341.32131.39815.40034.10051.07562.1735
N94.03843.56072.44621.37142.21613.51512.28491.39814.47864.38652.16771.0120
H102.07501.08072.06393.21343.75933.26885.13365.40034.47864.14596.44434.8730
H112.07793.29273.89153.38792.17131.08302.91684.10054.38654.14595.02645.3618
H125.50715.42854.51323.23383.17584.53692.11811.07562.16776.44435.02642.5926
H134.80414.09652.81812.13113.20114.44353.25382.17351.01204.87305.36182.5926

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 127.575 N1 C2 H10 115.689
N1 C6 C5 120.239 N1 C6 H11 118.037
C2 N1 C6 117.983 C2 N3 C4 112.617
N3 C2 H10 116.735 N3 C4 C5 125.633
N3 C4 N9 128.843 C4 C5 C6 115.953
C4 C5 N7 111.238 C4 N9 C8 105.781
C4 N9 H13 126.136 C5 C4 N9 105.523
C5 C6 H11 121.725 C5 N7 C8 103.161
C6 C5 N7 132.810 N7 C8 N9 114.296
N7 C8 H12 123.852 C8 N9 H13 128.083
N9 C8 H12 121.852
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at B3PW91/3-21G* Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 N -0.532      
2 C 0.178      
3 N -0.584      
4 C 0.646      
5 C 0.119      
6 C 0.093      
7 N -0.556      
8 C 0.276      
9 N -0.790      
10 H 0.257      
11 H 0.262      
12 H 0.267      
13 H 0.364      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  2.147 3.115 0.000 3.783
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -49.719 6.303 0.000
y 6.303 -46.904 0.000
z 0.000 0.000 -52.429
Traceless
 xyz
x -0.052 6.303 0.000
y 6.303 4.170 0.000
z 0.000 0.000 -4.118
Polar
3z2-r2-8.235
x2-y2-2.815
xy6.303
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 13.855 1.372 0.000
y 1.372 10.484 0.000
z 0.000 0.000 3.185


<r2> (average value of r2) Å2
<r2> 257.220
(<r2>)1/2 16.038