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All results from a given calculation for C5H4N4 (purine)

using model chemistry: mPW1PW91/6-31G(2df,p)

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at mPW1PW91/6-31G(2df,p)
 hartrees
Energy at 0K-411.880065
Energy at 298.15K-411.888014
HF Energy-411.880065
Nuclear repulsion energy414.222561
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at mPW1PW91/6-31G(2df,p)
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3710 3542 95.55      
2 A' 3268 3120 0.49      
3 A' 3201 3056 14.84      
4 A' 3192 3047 15.02      
5 A' 1684 1608 67.30      
6 A' 1646 1571 81.48      
7 A' 1554 1484 25.74      
8 A' 1506 1438 3.15      
9 A' 1452 1386 60.46      
10 A' 1432 1367 24.33      
11 A' 1387 1324 62.20      
12 A' 1334 1273 12.64      
13 A' 1326 1266 15.11      
14 A' 1297 1238 34.39      
15 A' 1217 1162 7.38      
16 A' 1153 1100 5.67      
17 A' 1100 1051 12.55      
18 A' 952 909 1.84      
19 A' 918 876 12.91      
20 A' 816 779 15.56      
21 A' 663 633 0.52      
22 A' 572 546 4.33      
23 A' 448 428 12.12      
24 A" 1014 968 0.44      
25 A" 962 919 6.11      
26 A" 899 858 3.90      
27 A" 839 801 9.85      
28 A" 675 644 7.05      
29 A" 632 604 21.90      
30 A" 545 521 93.45      
31 A" 425 405 3.25      
32 A" 249 238 0.38      
33 A" 237 226 4.39      

Unscaled Zero Point Vibrational Energy (zpe) 21152.3 cm-1
Scaled (by 0.9547) Zero Point Vibrational Energy (zpe) 20194.1 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at mPW1PW91/6-31G(2df,p)
ABC
0.13913 0.05906 0.04146

See section I.F.4 to change rotational constant units
Geometric Data calculated at mPW1PW91/6-31G(2df,p)

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.809 -1.249 0.000
C2 -2.092 0.067 0.000
N3 -1.265 1.097 0.000
C4 0.000 0.700 0.000
C5 0.450 -0.624 0.000
C6 -0.538 -1.603 0.000
N7 1.827 -0.687 0.000
C8 2.173 0.567 0.000
N9 1.124 1.460 0.000
H10 -3.149 0.307 0.000
H11 -0.313 -2.665 0.000
H12 3.199 0.900 0.000
H13 1.168 2.463 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.34652.40882.65912.34351.31933.67914.37693.99262.05322.05915.44974.7586
C21.34651.32142.18592.63442.28153.99114.29493.50481.08303.25995.35644.0460
N32.40881.32141.32572.42972.79623.56963.47882.41592.04293.88034.46792.7900
C42.65912.18591.32571.39852.36462.29372.17741.35683.17293.37903.20522.1151
C52.34352.63442.42971.39851.39021.37872.09542.19083.71682.17823.14373.1701
C61.31932.28152.79622.36461.39022.53603.47273.48463.23451.08524.49774.4094
N73.67913.99113.56962.29371.37872.53601.30112.25935.07372.91412.09813.2184
C84.37694.29493.47882.17742.09543.47271.30111.37815.32824.07771.07832.1462
N93.99263.50482.41591.35682.19083.48462.25931.37814.42524.36792.14931.0041
H102.05321.08302.04293.17293.71683.23455.07375.32824.42524.10706.37514.8251
H112.05913.25993.88033.37902.17821.08522.91414.07774.36794.10705.00455.3375
H125.44975.35644.46793.20523.14374.49772.09811.07832.14936.37515.00452.5626
H134.75864.04602.79002.11513.17014.40943.21842.14621.00414.82515.33752.5626

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 129.075 N1 C2 H10 114.933
N1 C6 C5 119.720 N1 C6 H11 117.486
C2 N1 C6 117.695 C2 N3 C4 111.330
N3 C2 H10 115.992 N3 C4 C5 126.204
N3 C4 N9 128.472 C4 C5 C6 115.975
C4 C5 N7 111.359 C4 N9 C8 105.526
C4 N9 H13 126.605 C5 C4 N9 105.324
C5 C6 H11 122.794 C5 N7 C8 102.841
C6 C5 N7 132.665 N7 C8 N9 114.950
N7 C8 H12 123.449 C8 N9 H13 127.868
N9 C8 H12 121.601
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at mPW1PW91/6-31G(2df,p) Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 N -0.297      
2 C 0.057      
3 N -0.389      
4 C 0.469      
5 C 0.197      
6 C -0.062      
7 N -0.358      
8 C 0.025      
9 N -0.428      
10 H 0.150      
11 H 0.159      
12 H 0.174      
13 H 0.304      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  2.170 2.921 0.000 3.639
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -49.177 6.106 0.000
y 6.106 -45.984 0.000
z 0.000 0.000 -50.673
Traceless
 xyz
x -0.849 6.106 0.000
y 6.106 3.941 0.000
z 0.000 0.000 -3.092
Polar
3z2-r2-6.184
x2-y2-3.193
xy6.106
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 14.916 1.351 0.000
y 1.351 11.557 0.000
z 0.000 0.000 4.979


<r2> (average value of r2) Å2
<r2> 251.461
(<r2>)1/2 15.858